Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 NEK3-211ENST00000629912 141 ntTSL 5 BASIC9.2□□□□□ -0.94
TRIM41Q8WV44 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
TRIM41Q8WV44 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TRIM41Q8WV44 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TRIM41Q8WV44 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC9.2□□□□□ -0.94
TRIM41Q8WV44 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM41Q8WV44 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC9.19□□□□□ -0.94
TRIM41Q8WV44 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM41Q8WV44 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM41Q8WV44 OR1L6-202ENST00000373684 1044 ntBASIC9.19□□□□□ -0.94
TRIM41Q8WV44 MIR514A2-201ENST00000385131 88 ntBASIC9.19□□□□□ -0.94
TRIM41Q8WV44 MIR514A3-201ENST00000385132 88 ntBASIC9.19□□□□□ -0.94
TRIM41Q8WV44 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
TRIM41Q8WV44 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM41Q8WV44 MIR2053-201ENST00000459295 91 ntBASIC9.19□□□□□ -0.94
TRIM41Q8WV44 GMFBP1-201ENST00000467831 427 ntBASIC9.19□□□□□ -0.94
TRIM41Q8WV44 MRPS35P2-201ENST00000508242 191 ntBASIC9.19□□□□□ -0.94
TRIM41Q8WV44 RPL39P5-202ENST00000512505 151 ntBASIC9.19□□□□□ -0.94
TRIM41Q8WV44 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC9.19□□□□□ -0.94
TRIM41Q8WV44 AP003497.1-201ENST00000528472 562 ntBASIC9.19□□□□□ -0.94
TRIM41Q8WV44 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC9.19□□□□□ -0.94
TRIM41Q8WV44 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM41Q8WV44 NAA50-211ENST00000630058 177 ntTSL 5 BASIC9.19□□□□□ -0.94
TRIM41Q8WV44 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
TRIM41Q8WV44 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM41Q8WV44 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM41Q8WV44 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
TRIM41Q8WV44 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC9.18□□□□□ -0.94
TRIM41Q8WV44 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
TRIM41Q8WV44 RNU6-984P-201ENST00000363236 109 ntBASIC9.18□□□□□ -0.94
TRIM41Q8WV44 Y_RNA.158-201ENST00000363651 101 ntBASIC9.18□□□□□ -0.94
TRIM41Q8WV44 Y_RNA.339-201ENST00000365325 102 ntBASIC9.18□□□□□ -0.94
TRIM41Q8WV44 RNU6-606P-201ENST00000384721 111 ntBASIC9.18□□□□□ -0.94
TRIM41Q8WV44 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TRIM41Q8WV44 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC9.18□□□□□ -0.94
TRIM41Q8WV44 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC9.18□□□□□ -0.94
TRIM41Q8WV44 AC073069.1-201ENST00000428657 441 ntBASIC9.18□□□□□ -0.94
TRIM41Q8WV44 HMGB3P11-201ENST00000440127 604 ntBASIC9.18□□□□□ -0.94
TRIM41Q8WV44 TXNP1-201ENST00000441872 371 ntBASIC9.18□□□□□ -0.94
TRIM41Q8WV44 AL358232.1-201ENST00000448030 501 ntBASIC9.18□□□□□ -0.94
TRIM41Q8WV44 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC9.18□□□□□ -0.94
TRIM41Q8WV44 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC9.18□□□□□ -0.94
TRIM41Q8WV44 RPS15AP1-201ENST00000457423 391 ntBASIC9.18□□□□□ -0.94
TRIM41Q8WV44 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC9.18□□□□□ -0.94
TRIM41Q8WV44 RNA5SP143-201ENST00000516936 115 ntBASIC9.18□□□□□ -0.94
TRIM41Q8WV44 SCARNA16.4-201ENST00000516956 187 ntBASIC9.18□□□□□ -0.94
TRIM41Q8WV44 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC9.18□□□□□ -0.94
TRIM41Q8WV44 MAL2-208ENST00000523307 556 ntTSL 4 BASIC9.18□□□□□ -0.94
TRIM41Q8WV44 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC9.18□□□□□ -0.94
TRIM41Q8WV44 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC9.18□□□□□ -0.94
TRIM41Q8WV44 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC9.18□□□□□ -0.94
TRIM41Q8WV44 AL355834.1-201ENST00000556602 3965 ntBASIC9.18□□□□□ -0.94
TRIM41Q8WV44 AC239868.2-201ENST00000564237 4527 ntBASIC9.18□□□□□ -0.94
TRIM41Q8WV44 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC9.18□□□□□ -0.94
TRIM41Q8WV44 MIR7973-1-201ENST00000614683 76 ntBASIC9.18□□□□□ -0.94
TRIM41Q8WV44 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC9.18□□□□□ -0.94
TRIM41Q8WV44 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
TRIM41Q8WV44 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
TRIM41Q8WV44 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TRIM41Q8WV44 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TRIM41Q8WV44 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TRIM41Q8WV44 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TRIM41Q8WV44 Y_RNA.112-201ENST00000363250 102 ntBASIC9.17□□□□□ -0.94
TRIM41Q8WV44 AL031679.1-201ENST00000400616 525 ntBASIC9.17□□□□□ -0.94
TRIM41Q8WV44 AC074085.1-201ENST00000413598 418 ntBASIC9.17□□□□□ -0.94
TRIM41Q8WV44 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC9.17□□□□□ -0.94
TRIM41Q8WV44 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC9.17□□□□□ -0.94
TRIM41Q8WV44 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC9.17□□□□□ -0.94
TRIM41Q8WV44 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC9.17□□□□□ -0.94
TRIM41Q8WV44 AC104058.1-201ENST00000448028 297 ntBASIC9.17□□□□□ -0.94
TRIM41Q8WV44 AC104563.1-201ENST00000476147 376 ntBASIC9.17□□□□□ -0.94
TRIM41Q8WV44 AC098591.2-201ENST00000510152 315 ntBASIC9.17□□□□□ -0.94
TRIM41Q8WV44 RNU6-941P-201ENST00000516346 108 ntBASIC9.17□□□□□ -0.94
TRIM41Q8WV44 RNA5SP337-201ENST00000517007 109 ntBASIC9.17□□□□□ -0.94
TRIM41Q8WV44 RGS4-209ENST00000531057 544 ntTSL 4 BASIC9.17□□□□□ -0.94
TRIM41Q8WV44 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC9.17□□□□□ -0.94
TRIM41Q8WV44 AL356432.3-201ENST00000568952 465 ntBASIC9.17□□□□□ -0.94
TRIM41Q8WV44 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC9.17□□□□□ -0.94
TRIM41Q8WV44 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC9.17□□□□□ -0.94
TRIM41Q8WV44 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC9.17□□□□□ -0.94
TRIM41Q8WV44 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC9.17□□□□□ -0.94
TRIM41Q8WV44 AC008782.1-201ENST00000603386 430 ntBASIC9.17□□□□□ -0.94
TRIM41Q8WV44 AC015712.7-201ENST00000615211 635 ntBASIC9.17□□□□□ -0.94
TRIM41Q8WV44 U6.101-201ENST00000637707 76 ntBASIC9.17□□□□□ -0.94
TRIM41Q8WV44 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
TRIM41Q8WV44 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC9.17□□□□□ -0.94
TRIM41Q8WV44 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TRIM41Q8WV44 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC9.17□□□□□ -0.94
TRIM41Q8WV44 AL049641.1-201ENST00000441055 1948 ntBASIC9.17□□□□□ -0.94
TRIM41Q8WV44 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TRIM41Q8WV44 MTND5P19-201ENST00000424872 1794 ntBASIC9.17□□□□□ -0.94
TRIM41Q8WV44 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TRIM41Q8WV44 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
TRIM41Q8WV44 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms