Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AC090772.4-201ENST00000623599 362 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 AC010608.3-201ENST00000625048 527 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 AP000553.6-201ENST00000641242 118 ntBASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRAF3IP1Q8TDR0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 RNVU1-3-201ENST00000364313 161 ntBASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 RN7SKP227-201ENST00000364445 330 ntBASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 RNU6-335P-201ENST00000364563 113 ntBASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 Y_RNA.493-201ENST00000384422 102 ntBASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 RPL32P23-201ENST00000397237 405 ntBASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 RNU2-28P-201ENST00000410457 189 ntBASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 AL035410.1-201ENST00000427409 427 ntBASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 AC004975.1-201ENST00000428733 208 ntBASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 NEK4P1-201ENST00000433383 879 ntBASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 MRPS18BP2-201ENST00000434310 759 ntBASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 NDUFB1P1-201ENST00000435191 180 ntBASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 RPL23AP44-201ENST00000482216 473 ntBASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 AC108078.3-201ENST00000502633 489 ntBASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 GTF2IP8-201ENST00000560687 584 ntBASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 MTND3P13-201ENST00000574391 343 ntBASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 AL035411.2-201ENST00000604022 421 ntBASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 AP001521.1-201ENST00000609150 300 ntBASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 U7.8-201ENST00000619968 63 ntBASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 AC073348.1-201ENST00000623002 331 ntBASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 LINC02211-204ENST00000642024 1070 ntBASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRAF3IP1Q8TDR0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 AC138915.3-201ENST00000562908 1389 ntBASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 GDI2P1-201ENST00000429312 1336 ntBASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 RPL23AP47-201ENST00000408017 460 ntBASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 AL513174.1-201ENST00000423182 629 ntBASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 AL049610.1-201ENST00000423374 372 ntBASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 AC006989.1-201ENST00000427212 131 ntBASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 MTCYBP31-201ENST00000438855 1122 ntBASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 AC127537.2-201ENST00000439258 465 ntBASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 RPS29P7-201ENST00000439662 171 ntBASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 EXOSC3P1-201ENST00000448649 500 ntBASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 RFC5P1-201ENST00000454419 874 ntBASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 RPL5P24-201ENST00000463742 885 ntBASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 HMGB3P15-201ENST00000507326 574 ntBASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 AC008489.1-201ENST00000524271 483 ntBASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 MIR4509-3-201ENST00000578671 94 ntBASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 MIR4509-2-201ENST00000583920 94 ntBASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.81□□□□□ -1.8
TRAF3IP1Q8TDR0 AC231759.1-201ENST00000616455 597 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms