Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 RPL21P132-201ENST00000331267 462 ntBASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 AL161781.1-201ENST00000354277 403 ntBASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 NDUFB4P5-201ENST00000415445 361 ntBASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 RNA5SP282-201ENST00000516355 108 ntBASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ALMS1Q8TCU4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 AL049610.1-201ENST00000423374 372 ntBASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 RPS29P6-201ENST00000438196 145 ntBASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 RPS27AP9-201ENST00000477681 438 ntBASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 AC010265.1-201ENST00000513509 211 ntBASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 OR5AK3P-201ENST00000527486 1297 ntBASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 AC008264.2-201ENST00000610193 3731 ntBASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 AC133134.1-201ENST00000466800 359 ntBASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 OR5H3P-201ENST00000502817 919 ntBASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 TMEM248P1-201ENST00000510579 951 ntBASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 MIR7153-201ENST00000637758 57 ntBASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 Y_RNA.4-201ENST00000362333 112 ntBASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 MIR27B-201ENST00000385129 97 ntBASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 AL353597.2-202ENST00000434901 373 ntBASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 AC092608.2-201ENST00000624427 218 ntBASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
ALMS1Q8TCU4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
ALMS1Q8TCU4 CEACAMP4-201ENST00000457676 421 ntBASIC1.84□□□□□ -2.11
ALMS1Q8TCU4 AC008716.1-201ENST00000511084 513 ntBASIC1.84□□□□□ -2.11
ALMS1Q8TCU4 HIGD1AP10-201ENST00000527837 282 ntBASIC1.84□□□□□ -2.11
ALMS1Q8TCU4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.84□□□□□ -2.11
ALMS1Q8TCU4 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.84□□□□□ -2.11
ALMS1Q8TCU4 SNORA50A-202ENST00000629536 136 ntBASIC1.84□□□□□ -2.11
ALMS1Q8TCU4 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
ALMS1Q8TCU4 ZNF72P-201ENST00000425869 1908 ntBASIC1.84□□□□□ -2.11
ALMS1Q8TCU4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
ALMS1Q8TCU4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.84□□□□□ -2.11
ALMS1Q8TCU4 CKS1BP2-201ENST00000497342 240 ntBASIC1.84□□□□□ -2.11
ALMS1Q8TCU4 RPL7P20-201ENST00000520308 745 ntBASIC1.84□□□□□ -2.11
ALMS1Q8TCU4 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.84□□□□□ -2.11
ALMS1Q8TCU4 AADACP1-206ENST00000561502 1193 ntBASIC1.84□□□□□ -2.11
ALMS1Q8TCU4 AP001004.1-201ENST00000582468 324 ntBASIC1.84□□□□□ -2.11
ALMS1Q8TCU4 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC1.84□□□□□ -2.11
ALMS1Q8TCU4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.84□□□□□ -2.11
ALMS1Q8TCU4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
ALMS1Q8TCU4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC1.84□□□□□ -2.11
ALMS1Q8TCU4 AC138915.3-201ENST00000562908 1389 ntBASIC1.84□□□□□ -2.11
ALMS1Q8TCU4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
ALMS1Q8TCU4 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.84□□□□□ -2.12
ALMS1Q8TCU4 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
ALMS1Q8TCU4 AC234781.5-201ENST00000508429 271 ntBASIC1.84□□□□□ -2.12
ALMS1Q8TCU4 RN7SKP272-201ENST00000516988 232 ntBASIC1.84□□□□□ -2.12
ALMS1Q8TCU4 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
ALMS1Q8TCU4 FER-202ENST00000438717 1531 ntTSL 2 BASIC1.84□□□□□ -2.12
ALMS1Q8TCU4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
ALMS1Q8TCU4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC1.84□□□□□ -2.12
ALMS1Q8TCU4 SYT14P1-202ENST00000600441 1448 ntBASIC1.84□□□□□ -2.12
ALMS1Q8TCU4 OR4G1P-202ENST00000641173 1788 ntBASIC1.84□□□□□ -2.12
ALMS1Q8TCU4 HMGB1P15-201ENST00000453854 435 ntBASIC1.84□□□□□ -2.12
ALMS1Q8TCU4 RNA5SP320-201ENST00000516263 124 ntBASIC1.84□□□□□ -2.12
ALMS1Q8TCU4 MTND5P21-201ENST00000531961 522 ntBASIC1.84□□□□□ -2.12
ALMS1Q8TCU4 AC069234.5-201ENST00000611056 416 ntBASIC1.84□□□□□ -2.12
ALMS1Q8TCU4 AL355493.4-201ENST00000618530 292 ntBASIC1.84□□□□□ -2.12
ALMS1Q8TCU4 AC006111.3-201ENST00000622137 383 ntBASIC1.84□□□□□ -2.12
ALMS1Q8TCU4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 AC093010.3-201ENST00000570269 15214 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 RPS3AP26-201ENST00000398259 784 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 HMGB1P13-201ENST00000406019 642 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 RNU4-26P-201ENST00000410270 107 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 RAP1BP1-201ENST00000412709 553 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 Z98742.3-201ENST00000418637 326 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 HMGB3P12-201ENST00000438745 556 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 HMGB3P11-201ENST00000440127 604 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 VN1R48P-201ENST00000448149 1036 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 AC007938.3-201ENST00000604965 623 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 PHKBP1-201ENST00000450951 1951 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 TRGV5P-201ENST00000419915 354 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms