Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 PRO1804-201ENST00000623780 2050 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 AC018529.3-201ENST00000624212 2254 ntBASIC2.94□□□□□ -1.94
LINC01006Q8NI28 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01006Q8NI28 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AC007685.1-201ENST00000329806 452 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 RNU6-984P-201ENST00000363236 109 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 LAP3P1-201ENST00000403648 294 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 RAP1BP1-201ENST00000412709 553 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 KCTD9P3-201ENST00000434597 1169 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 ART2BP-201ENST00000453501 499 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 ANKRD26P4-201ENST00000455755 950 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AL133477.1-201ENST00000457472 514 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 snoU13.7-201ENST00000459220 104 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 RPL7P24-201ENST00000493052 752 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AC010486.2-201ENST00000505572 483 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AC079395.1-201ENST00000510981 262 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 HMGB3P13-201ENST00000511263 607 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 RNU6-1129P-201ENST00000515964 104 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 RNY4P37-201ENST00000516225 96 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 MYL12AP1-201ENST00000518490 515 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 OR5M7P-201ENST00000526140 972 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AC069240.1-201ENST00000548774 375 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AC087465.1-201ENST00000560574 245 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AL133507.1-201ENST00000605269 557 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AL160281.1-201ENST00000605307 311 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AC010680.4-201ENST00000605334 543 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AC113194.1-201ENST00000606037 500 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 LINC00901.1-201ENST00000617252 152 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AC121761.2-201ENST00000617300 689 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AC048344.4-201ENST00000619744 527 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AC098679.5-201ENST00000624394 571 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 AC025125.1-201ENST00000624743 1922 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.93□□□□□ -1.94
LINC01006Q8NI28 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
LINC01006Q8NI28 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LINC01006Q8NI28 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
LINC01006Q8NI28 MTND5P31-201ENST00000419366 1374 ntBASIC2.92□□□□□ -1.94
LINC01006Q8NI28 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LINC01006Q8NI28 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
LINC01006Q8NI28 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LINC01006Q8NI28 RNU6-921P-201ENST00000384361 107 ntBASIC2.92□□□□□ -1.94
LINC01006Q8NI28 TAF9BP1-201ENST00000396646 746 ntBASIC2.92□□□□□ -1.94
LINC01006Q8NI28 TMSB4XP8-201ENST00000402089 135 ntBASIC2.92□□□□□ -1.94
LINC01006Q8NI28 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
LINC01006Q8NI28 RNU2-21P-201ENST00000410368 188 ntBASIC2.92□□□□□ -1.94
LINC01006Q8NI28 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.92□□□□□ -1.94
LINC01006Q8NI28 TMSB4XP6-201ENST00000415187 135 ntBASIC2.92□□□□□ -1.94
LINC01006Q8NI28 NUP35P2-201ENST00000416748 943 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms