Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 AC021678.1-201ENST00000505195 936 ntBASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 CR383656.14-201ENST00000551951 406 ntBASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 MIR5186-201ENST00000577504 120 ntBASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 AC006130.2-201ENST00000586202 326 ntBASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 BNIP3P33-201ENST00000598912 569 ntBASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 AC009220.3-201ENST00000604318 586 ntBASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 AC092650.2-201ENST00000619984 902 ntBASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 AC022509.4-201ENST00000621404 572 ntBASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.11□□□□□ -1.91
CLHC1Q8NHS4 MTND5P7-201ENST00000413558 1798 ntBASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 RNA5SP383-201ENST00000362934 120 ntBASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 SNORA14A-201ENST00000364773 135 ntBASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 OR6K3-202ENST00000368146 996 ntBASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 Y_RNA.493-201ENST00000384422 102 ntBASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 AL031121.1-201ENST00000406553 254 ntBASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 RNA5SP56-201ENST00000410277 118 ntBASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 AC245052.5-201ENST00000416320 649 ntBASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 OFD1P18Y-201ENST00000420889 959 ntBASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 AC012498.1-201ENST00000424037 437 ntBASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 AC104332.2-201ENST00000429959 156 ntBASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 B3GNT2P1-201ENST00000434960 952 ntBASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 AC093663.1-201ENST00000497190 394 ntBASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 SLC25A15P5-201ENST00000508033 253 ntBASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 KLHL2P1-201ENST00000508691 521 ntBASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 PAICSP4-201ENST00000517543 1253 ntBASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 HMGB1P46-201ENST00000520062 610 ntBASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 COX6CP3-201ENST00000580869 223 ntBASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 CBX3P2-202ENST00000583365 535 ntBASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 AP003122.6-201ENST00000623831 495 ntBASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLHC1Q8NHS4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 CD24P4-201ENST00000382840 243 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 SNORA51.12-201ENST00000384448 134 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 AC063979.1-201ENST00000415539 377 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 RPL36P19-201ENST00000430744 301 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 RPL23AP22-201ENST00000437556 453 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 AL034418.1-201ENST00000448675 860 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 AC233982.1-201ENST00000451247 436 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 MRPL35P4-201ENST00000453682 566 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 AP002812.1-201ENST00000495378 474 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 KCTD9P5-201ENST00000504141 1170 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 AC008885.2-201ENST00000509506 930 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 SAP18P1-201ENST00000512058 390 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 RNA5SP217-201ENST00000515959 91 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 ERHP1-201ENST00000523006 310 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 CIR1P1-201ENST00000524055 1133 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 AC034105.4-201ENST00000568304 277 ntBASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.09□□□□□ -1.91
CLHC1Q8NHS4 AC010653.1-201ENST00000571108 881 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms