Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AL606537.1-201ENST00000607258 2011 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 RNU1-146P-201ENST00000364015 165 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 RNA5SP242-201ENST00000364171 118 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 RNU6-522P-201ENST00000364497 107 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 RN7SKP153-201ENST00000365026 316 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 SNORD37.1-201ENST00000390968 65 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 RNA5SP487-201ENST00000410186 122 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 RNU4-26P-201ENST00000410270 107 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 RN7SKP293-201ENST00000411389 296 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 MTCO2P27-201ENST00000420740 428 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 VTI1BP4-201ENST00000427516 527 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 OR4K11P-201ENST00000431829 904 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 TIMM9P1-201ENST00000436122 256 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AC108734.1-201ENST00000439549 399 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AC093156.1-201ENST00000440382 670 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AC023141.9-201ENST00000458734 412 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AC087879.1-201ENST00000474343 374 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 RN7SL717P-201ENST00000478343 297 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AL163540.1-201ENST00000485382 386 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 FAM206BP-201ENST00000510179 541 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AC098976.1-201ENST00000513014 541 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 RN7SKP219-201ENST00000516825 296 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 Y_RNA.718-201ENST00000517110 102 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 RPL7P20-201ENST00000520308 745 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 HMGB1P40-201ENST00000525121 540 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 OR4K8P-201ENST00000578842 1048 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 MIR3176-201ENST00000582210 90 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AC008737.2-201ENST00000599446 118 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AL512782.1-201ENST00000603093 364 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AL080274.1-201ENST00000605565 220 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AL121992.2-201ENST00000606262 256 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AC130324.3-201ENST00000614165 542 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AC138305.3-201ENST00000624988 240 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AL159972.1-201ENST00000625150 448 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 MTND4LP32-201ENST00000636111 270 ntBASIC4.98□□□□□ -1.61
NUP43Q8NFH3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 MTND5P16-201ENST00000460269 1703 ntBASIC4.97□□□□□ -1.61
NUP43Q8NFH3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
NUP43Q8NFH3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NUP43Q8NFH3 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUP43Q8NFH3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
NUP43Q8NFH3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.97□□□□□ -1.61
NUP43Q8NFH3 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
NUP43Q8NFH3 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.97□□□□□ -1.61
NUP43Q8NFH3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NUP43Q8NFH3 AC067945.1-201ENST00000342609 618 ntBASIC4.97□□□□□ -1.61
NUP43Q8NFH3 RNU5E-8P-201ENST00000363502 116 ntBASIC4.97□□□□□ -1.61
NUP43Q8NFH3 RNA5SP335-201ENST00000363817 110 ntBASIC4.97□□□□□ -1.61
NUP43Q8NFH3 RNU6-38P-201ENST00000384085 107 ntBASIC4.97□□□□□ -1.61
NUP43Q8NFH3 RNU6-1297P-201ENST00000384415 104 ntBASIC4.97□□□□□ -1.61
NUP43Q8NFH3 U3.20-201ENST00000390909 217 ntBASIC4.97□□□□□ -1.61
NUP43Q8NFH3 AL359634.1-202ENST00000404721 284 ntBASIC4.97□□□□□ -1.61
NUP43Q8NFH3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP43Q8NFH3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.97□□□□□ -1.61
NUP43Q8NFH3 AC245054.2-201ENST00000415639 319 ntBASIC4.97□□□□□ -1.61
NUP43Q8NFH3 BEND7P1-201ENST00000422058 457 ntBASIC4.97□□□□□ -1.61
NUP43Q8NFH3 AL121776.1-201ENST00000429337 372 ntBASIC4.97□□□□□ -1.61
NUP43Q8NFH3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP43Q8NFH3 RPS3AP52-201ENST00000435639 297 ntBASIC4.97□□□□□ -1.61
NUP43Q8NFH3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.97□□□□□ -1.61
NUP43Q8NFH3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP43Q8NFH3 RPS11P7-201ENST00000442125 465 ntBASIC4.97□□□□□ -1.61
NUP43Q8NFH3 RNU6-333P-201ENST00000459117 107 ntBASIC4.97□□□□□ -1.61
NUP43Q8NFH3 RPL21P99-201ENST00000480369 423 ntBASIC4.97□□□□□ -1.61
NUP43Q8NFH3 AL136038.1-201ENST00000497246 351 ntBASIC4.97□□□□□ -1.61
NUP43Q8NFH3 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP43Q8NFH3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.97□□□□□ -1.61
NUP43Q8NFH3 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP43Q8NFH3 RNU6-1046P-201ENST00000516538 107 ntBASIC4.97□□□□□ -1.61
NUP43Q8NFH3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP43Q8NFH3 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP43Q8NFH3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP43Q8NFH3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms