Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 MIR181A2-201ENST00000384863 110 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 RPL7P8-201ENST00000411964 730 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AL049610.1-201ENST00000423374 372 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 HMGB3P11-201ENST00000440127 604 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 RPL23AP31-201ENST00000456160 467 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 RPL23AP67-201ENST00000465341 474 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 RN7SKP209-201ENST00000516888 304 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AC026790.2-201ENST00000606282 430 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 FAM35CP-201ENST00000554755 2470 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 UBTFL10-201ENST00000528532 562 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AHI1-217ENST00000534469 680 ntTSL 3 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AC010680.4-201ENST00000605334 543 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AL162389.1-201ENST00000449233 177 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AL158827.2-201ENST00000602494 330 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 RPL23AP92-201ENST00000603609 255 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 C2orf27A-204ENST00000623058 969 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AL691447.3-201ENST00000635020 330 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 MTCO1P14-201ENST00000441695 1559 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 MTCO3P31-201ENST00000405526 789 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 RNA5SP21-201ENST00000410917 96 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AC087499.2-201ENST00000432861 149 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AC108860.1-201ENST00000484521 383 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 MTCYBP37-201ENST00000510642 1133 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 SNORD53-201ENST00000579969 78 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AC025811.1-201ENST00000604312 472 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AC023813.4-201ENST00000607580 580 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 MIR9-1-201ENST00000385198 89 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 RPS7P13-201ENST00000413955 498 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AL513328.1-201ENST00000446460 224 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AC107918.3-201ENST00000533272 382 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 OR4H12P-201ENST00000556269 907 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AADACP1-206ENST00000561502 1193 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 OSBPL9P4-201ENST00000371707 1800 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC069218.2-201ENST00000411665 344 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 ELOCP23-201ENST00000452014 332 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC011037.1-201ENST00000483964 558 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC108729.3-201ENST00000513484 108 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 SMARCE1P4-201ENST00000523647 241 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC091903.1-201ENST00000624322 454 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC105074.1-201ENST00000623380 3095 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 SNORD56.3-201ENST00000363507 71 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 TRIAP1P1-201ENST00000427062 225 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC007563.3-201ENST00000433233 371 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC146507.2-201ENST00000460608 476 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 BMS1P7-201ENST00000602440 1052 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 RNU1-112P-201ENST00000364401 164 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 CRP-202ENST00000368110 667 ntTSL 3 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 RNU6-14P-201ENST00000384630 106 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 RPS4XP7-201ENST00000406274 780 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AL138787.1-202ENST00000437804 898 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 RNA5SP367-201ENST00000516557 118 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms