Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC063979.1-201ENST00000415539 377 ntBASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 OR4K6P-201ENST00000416478 897 ntBASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 AL353678.1-201ENST00000422735 741 ntBASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 RPS24P8-201ENST00000431490 402 ntBASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 NDUFA5P10-201ENST00000432147 357 ntBASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 AC008571.1-201ENST00000467232 300 ntBASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 AC017007.3-201ENST00000479865 435 ntBASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 AC010285.3-201ENST00000511668 676 ntBASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 AF131215.7-201ENST00000602443 707 ntBASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 MIR7112-201ENST00000616126 65 ntBASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 AC138932.5-201ENST00000617759 563 ntBASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 AC022079.2-201ENST00000619739 566 ntBASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CCDC112Q8NEF3 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 RPL36AP6-201ENST00000435770 321 ntBASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 AC091862.1-201ENST00000438016 1100 ntBASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 RPL23AP33-201ENST00000442301 452 ntBASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 AC016696.1-201ENST00000446949 318 ntBASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 RN7SL297P-201ENST00000483161 293 ntBASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 ACTR6P1-201ENST00000514311 1104 ntBASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 RNU6-826P-201ENST00000516827 104 ntBASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 AC107016.2-201ENST00000547968 190 ntBASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 AC011471.1-201ENST00000585766 187 ntBASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 CKS1BP3-201ENST00000600888 237 ntBASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 AL133393.1-201ENST00000603277 287 ntBASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 AC090115.4-201ENST00000609970 188 ntBASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 NF1P10-201ENST00000613227 742 ntBASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 AC011472.4-201ENST00000615848 491 ntBASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 AC002076.2-201ENST00000617362 122 ntBASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 AC007318.2-201ENST00000620999 243 ntBASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 AC099506.2-201ENST00000623074 221 ntBASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 SCARNA15.3-201ENST00000626315 122 ntBASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 SCARNA4.1-201ENST00000628597 123 ntBASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC112Q8NEF3 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 ZNF833P-201ENST00000424938 1494 ntBASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 Y_RNA.111-201ENST00000363248 100 ntBASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 SNORD67-201ENST00000390833 111 ntBASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 RNU4-47P-201ENST00000410876 114 ntBASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 VN1R48P-201ENST00000448149 1036 ntBASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 AC093392.2-201ENST00000450682 337 ntBASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 VN1R17P-201ENST00000472048 1090 ntBASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 SEC11B-201ENST00000518383 499 ntBASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 AC022616.2-201ENST00000523185 300 ntBASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 OR6C73P-201ENST00000546432 358 ntBASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 AL163153.1-201ENST00000554223 283 ntBASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 AC010653.1-201ENST00000571108 881 ntBASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 MIR4325-201ENST00000583049 90 ntBASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC112Q8NEF3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 RNU1-35P-201ENST00000362782 153 ntBASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 MIR181A2-201ENST00000384863 110 ntBASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 MIR128-1-201ENST00000384921 82 ntBASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 SNORA48.5-201ENST00000391143 135 ntBASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 AL590290.1-201ENST00000405336 380 ntBASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 U3.42-201ENST00000408746 214 ntBASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 RPL31P2-201ENST00000413849 377 ntBASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms