Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 MIR432-201ENST00000606207 94 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AC090948.2-201ENST00000607363 564 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AP001521.1-201ENST00000609150 300 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AC092794.1-201ENST00000612734 582 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 AC116165.2-201ENST00000616705 206 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 uc_338.13-201ENST00000618243 179 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 MFSD8-242ENST00000641690 4199 ntBASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CLIP4Q8N3C7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AC074029.4-201ENST00000624796 1859 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 Y_RNA.41-201ENST00000362646 102 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 MIR506-201ENST00000384998 124 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 RNA5SP332-201ENST00000391063 115 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AC073264.1-201ENST00000411508 416 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AL953862.1-201ENST00000423016 168 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AL158073.1-201ENST00000426848 1104 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AL132765.1-201ENST00000434165 553 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 Z74696.2-201ENST00000436514 498 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AL772161.1-201ENST00000439130 476 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AL357520.1-201ENST00000441557 453 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AL592447.1-201ENST00000447592 540 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 SSXP1-201ENST00000453640 473 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AC093899.1-201ENST00000457984 376 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AC231760.1-201ENST00000498002 260 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AK3P4-201ENST00000504283 583 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 DUXAP2-201ENST00000519198 589 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 DEFB131D-201ENST00000526803 184 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 SERPINE4P-201ENST00000554978 281 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AC068831.4-201ENST00000556118 109 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 MIR4716-201ENST00000579628 84 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 MIR548AB-201ENST00000584917 84 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AC012065.4-201ENST00000602445 679 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AC113403.1-201ENST00000604910 193 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AC108747.1-201ENST00000609508 535 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AC008498.1-201ENST00000613012 531 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AC008013.2-202ENST00000637965 364 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AC068137.3-201ENST00000639191 341 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 AC073869.6-201ENST00000640656 341 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 CYP1D1P-201ENST00000416662 1433 ntBASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.94□□□□□ -1.78
CLIP4Q8N3C7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 MTND4P16-201ENST00000466108 1367 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 AC092447.7-201ENST00000422212 1621 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 AC103591.2-201ENST00000265259 766 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 FGF7P2-201ENST00000332473 296 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 SNRPEP3-201ENST00000338402 276 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 Y_RNA.6-201ENST00000362350 114 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 RNA5SP391-201ENST00000363456 119 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 RNU6-1293P-201ENST00000384077 107 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 RNU6-398P-201ENST00000384143 109 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 Y_RNA.516-201ENST00000384541 124 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 RPS3AP23-201ENST00000401762 784 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 MTCYBP36-201ENST00000404146 440 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 AL138878.1-201ENST00000405131 347 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms