Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC067852.3-201ENST00000589177 561 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AC073539.2-201ENST00000597113 165 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AL158032.1-201ENST00000605401 106 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 MIR7109-201ENST00000613748 65 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AC116667.2-201ENST00000641075 823 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 STX3-208ENST00000641815 3236 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AL359976.1-201ENST00000418655 3528 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 AC074029.4-201ENST00000624796 1859 ntBASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
DEPDC4Q8N2C3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 SMG1P6-201ENST00000532337 2930 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 AC010894.1-201ENST00000313760 361 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 RNU1-5P-201ENST00000362684 144 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 SNORA23-201ENST00000365128 182 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 RNU6-214P-201ENST00000384130 107 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 RNU6-95P-201ENST00000384697 107 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 Y_RNA.574-201ENST00000384766 95 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 AL590632.1-201ENST00000424289 371 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 AC016027.5-201ENST00000427227 210 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 MRPS18BP2-201ENST00000434310 759 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 HMGB1P12-201ENST00000438594 598 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 U8.20-201ENST00000459445 131 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 DEFB109F-201ENST00000491870 277 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 RN7SL101P-201ENST00000496350 279 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 AC096745.1-201ENST00000509945 370 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 AL390198.2-201ENST00000510553 222 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 AC106800.3-201ENST00000511389 308 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 RNU6-475P-201ENST00000516073 104 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 RNU6-1095P-201ENST00000516148 108 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 RNA5SP473-201ENST00000516402 125 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 Y_RNA.721-201ENST00000517207 102 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 AC092121.1-201ENST00000569452 202 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 MIR4271-201ENST00000582451 67 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 AC005899.2-201ENST00000584353 90 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 MIR212-201ENST00000586026 110 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 MIR6849-201ENST00000618543 69 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 AP001005.3-201ENST00000622049 129 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 BTBD10P1-201ENST00000549824 1352 ntBASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
DEPDC4Q8N2C3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 AC138907.8-201ENST00000623981 2256 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 AL121886.1-201ENST00000358609 435 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 RNU6-1155P-201ENST00000363554 107 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 RN7SKP269-201ENST00000365545 319 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 Y_RNA.428-201ENST00000384078 102 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 Y_RNA.476-201ENST00000384347 108 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 Y_RNA.496-201ENST00000384444 101 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 SNORA7A-201ENST00000384765 139 ntBASIC5.86□□□□□ -1.47
DEPDC4Q8N2C3 AL929472.1-201ENST00000417484 429 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms