Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC6.11□□□□□ -1.43
NPAS3Q8IXF0 AC004584.2-201ENST00000570407 410 ntBASIC6.11□□□□□ -1.43
NPAS3Q8IXF0 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.11□□□□□ -1.43
NPAS3Q8IXF0 MIR548Y-201ENST00000582739 110 ntBASIC6.11□□□□□ -1.43
NPAS3Q8IXF0 BX284668.6-201ENST00000606899 438 ntBASIC6.11□□□□□ -1.43
NPAS3Q8IXF0 AL138825.1-201ENST00000618587 192 ntBASIC6.11□□□□□ -1.43
NPAS3Q8IXF0 AP000547.3-204ENST00000588548 2523 ntBASIC6.11□□□□□ -1.43
NPAS3Q8IXF0 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
NPAS3Q8IXF0 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPAS3Q8IXF0 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
NPAS3Q8IXF0 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.11□□□□□ -1.43
NPAS3Q8IXF0 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPAS3Q8IXF0 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPAS3Q8IXF0 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
NPAS3Q8IXF0 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPAS3Q8IXF0 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
NPAS3Q8IXF0 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPAS3Q8IXF0 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPAS3Q8IXF0 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPAS3Q8IXF0 AC078880.4-201ENST00000617627 1749 ntBASIC6.11□□□□□ -1.43
NPAS3Q8IXF0 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 RNU6-1298P-201ENST00000362456 101 ntBASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 RNA5SP219-201ENST00000390940 113 ntBASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 RNU6-121P-201ENST00000410525 99 ntBASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 CYCSP51-201ENST00000443545 318 ntBASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 FCF1P4-201ENST00000448326 183 ntBASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 COPS8P2-201ENST00000473228 627 ntBASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 DEFB109D-201ENST00000529497 240 ntBASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 OR11H5P-201ENST00000554039 926 ntBASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 AC022884.2-201ENST00000578535 580 ntBASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 IMMP1LP3-201ENST00000604197 224 ntBASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 U6.114-201ENST00000636407 96 ntBASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 AC068870.3-201ENST00000625077 2536 ntBASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.1□□□□□ -1.43
NPAS3Q8IXF0 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 HAUS6P2-201ENST00000433254 2404 ntBASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 RBPJP2-201ENST00000618187 1444 ntBASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 CASC19-284ENST00000642142 1868 ntBASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 AC008669.1-201ENST00000565823 2178 ntBASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 RNU6-1266P-201ENST00000362794 105 ntBASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 RNU6-343P-201ENST00000364709 104 ntBASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 MIR215-201ENST00000384858 110 ntBASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 MIR558-201ENST00000384920 94 ntBASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 RPL36AP36-201ENST00000418616 301 ntBASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 UBE2D3P2-201ENST00000424409 445 ntBASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 CFL1P1-202ENST00000432948 411 ntBASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 MRPS18BP2-201ENST00000434310 759 ntBASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 RPS12P17-201ENST00000438591 377 ntBASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 MTCO3P2-201ENST00000457365 171 ntBASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 RPL23AP40-201ENST00000487630 390 ntBASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 BX510359.5-201ENST00000515651 304 ntBASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 AF186190.1-201ENST00000517470 480 ntBASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 CYCSP28-201ENST00000534284 321 ntBASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 AC068790.3-201ENST00000602988 553 ntBASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 AC090525.3-201ENST00000605601 189 ntBASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 CCT8P1-201ENST00000413611 1657 ntBASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 AC010329.1-201ENST00000593903 8328 ntBASIC6.09□□□□□ -1.43
NPAS3Q8IXF0 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms