Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AC007742.1-201ENST00000425789 329 ntBASIC2.56□□□□□ -2
MRPL55Q7Z7F7 MTCO1P3-201ENST00000429327 192 ntBASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 HIGD1AP4-201ENST00000430194 280 ntBASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AL358472.1-201ENST00000431295 329 ntBASIC2.56□□□□□ -2
MRPL55Q7Z7F7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 ELOCP26-201ENST00000436067 329 ntBASIC2.56□□□□□ -2
MRPL55Q7Z7F7 GTF2IP7-202ENST00000436677 309 ntBASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 RN7SL738P-201ENST00000470264 297 ntBASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AC092185.1-201ENST00000491371 97 ntBASIC2.56□□□□□ -2
MRPL55Q7Z7F7 RPL31P61-201ENST00000496160 376 ntBASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AP001636.2-201ENST00000525517 696 ntBASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AP001189.2-201ENST00000527320 189 ntBASIC2.56□□□□□ -2
MRPL55Q7Z7F7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 NDUFS5P6-201ENST00000529136 295 ntBASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AC009643.1-201ENST00000532030 391 ntBASIC2.56□□□□□ -2
MRPL55Q7Z7F7 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AC068831.4-201ENST00000556118 109 ntBASIC2.56□□□□□ -2
MRPL55Q7Z7F7 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AC022968.1-201ENST00000567372 442 ntBASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 MIR5708-201ENST00000579723 85 ntBASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AC114878.2-201ENST00000604863 1251 ntBASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AC124016.2-201ENST00000610058 665 ntBASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AC018816.2-201ENST00000621460 353 ntBASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AC006111.3-201ENST00000622137 383 ntBASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AC109454.4-201ENST00000623411 649 ntBASIC2.56□□□□□ -2
MRPL55Q7Z7F7 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 AC009812.4-201ENST00000569134 1805 ntBASIC2.56□□□□□ -2
MRPL55Q7Z7F7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
MRPL55Q7Z7F7 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 OR11H4-201ENST00000315409 1082 ntBASIC2.55□□□□□ -2
MRPL55Q7Z7F7 SNRPEP3-201ENST00000338402 276 ntBASIC2.55□□□□□ -2
MRPL55Q7Z7F7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 RNU5D-1-201ENST00000363299 116 ntBASIC2.55□□□□□ -2
MRPL55Q7Z7F7 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 HSPE1P12-201ENST00000412576 301 ntBASIC2.55□□□□□ -2
MRPL55Q7Z7F7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.55□□□□□ -2
MRPL55Q7Z7F7 RPL7P44-201ENST00000424827 742 ntBASIC2.55□□□□□ -2
MRPL55Q7Z7F7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 AC011742.1-201ENST00000431448 434 ntBASIC2.55□□□□□ -2
MRPL55Q7Z7F7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.55□□□□□ -2
MRPL55Q7Z7F7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 AP000949.1-201ENST00000438328 629 ntBASIC2.55□□□□□ -2
MRPL55Q7Z7F7 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 RPL39P6-201ENST00000448289 150 ntBASIC2.55□□□□□ -2
MRPL55Q7Z7F7 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 AC093392.2-201ENST00000450682 337 ntBASIC2.55□□□□□ -2
MRPL55Q7Z7F7 MTCO3P20-201ENST00000454926 688 ntBASIC2.55□□□□□ -2
MRPL55Q7Z7F7 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 AC010468.1-201ENST00000461022 817 ntBASIC2.55□□□□□ -2
MRPL55Q7Z7F7 Z99496.1-201ENST00000469424 1477 ntBASIC2.55□□□□□ -2
MRPL55Q7Z7F7 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 COX7A2P2-201ENST00000505291 250 ntBASIC2.55□□□□□ -2
MRPL55Q7Z7F7 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 AC026726.1-201ENST00000512859 601 ntBASIC2.55□□□□□ -2
MRPL55Q7Z7F7 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC2.55□□□□□ -2
MRPL55Q7Z7F7 RNA5SP143-201ENST00000516936 115 ntBASIC2.55□□□□□ -2
MRPL55Q7Z7F7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 DEFB130C-202ENST00000530001 230 ntBASIC2.55□□□□□ -2
MRPL55Q7Z7F7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 OR4H12P-201ENST00000556269 907 ntBASIC2.55□□□□□ -2
MRPL55Q7Z7F7 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC2.55□□□□□ -2
MRPL55Q7Z7F7 MIR4277-201ENST00000578298 84 ntBASIC2.55□□□□□ -2
MRPL55Q7Z7F7 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms