Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 Y_RNA.276-201ENST00000364732 109 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 RNU6-128P-201ENST00000383976 107 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 Y_RNA.478-201ENST00000384358 107 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 RNU6-550P-201ENST00000391057 101 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 RNU6-55P-201ENST00000411092 107 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 GSTM3P2-201ENST00000412746 530 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 AC011933.1-201ENST00000413334 321 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 RPL35AP3-201ENST00000414680 288 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 GJA6P-201ENST00000415117 1042 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 AL606753.1-201ENST00000427435 87 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 USP9YP30-201ENST00000430729 455 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 RPL36P19-201ENST00000430744 301 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 RPL36AP6-201ENST00000435770 321 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 AC005077.1-201ENST00000449226 375 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 CFL1P4-201ENST00000451536 498 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 AP001992.1-205ENST00000462248 379 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 RN7SL269P-201ENST00000467795 305 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 RPL7P5-201ENST00000471472 736 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 AP002812.1-201ENST00000495378 474 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 Y_RNA.700-201ENST00000516806 100 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 RN7SKP92-201ENST00000517266 244 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 AP003396.4-201ENST00000527574 265 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 DYNLL1P4-201ENST00000549314 266 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 SETP7-201ENST00000552169 453 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 AC007956.1-201ENST00000555623 542 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 AC012254.3-201ENST00000591183 2117 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 AL031176.1-201ENST00000604554 466 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 MIR6809-201ENST00000612189 116 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 U6.104-201ENST00000637979 90 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 NXPH1-205ENST00000602349 1953 ntBASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6□□□□□ -1.45
LYSMD3Q7Z3D4 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 AC134882.1-201ENST00000603738 1676 ntBASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 RNU6-188P-201ENST00000364207 107 ntBASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 RNU6-225P-201ENST00000384613 103 ntBASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 HMGN1P20-201ENST00000411849 300 ntBASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 ELOCP20-201ENST00000422460 345 ntBASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 RBMY1KP-201ENST00000423480 476 ntBASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 AC105402.2-201ENST00000438503 358 ntBASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 CEACAMP9-201ENST00000442990 513 ntBASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 RPS7P3-201ENST00000443360 580 ntBASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 AC092865.4-201ENST00000477936 615 ntBASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 AC025458.1-201ENST00000506046 166 ntBASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 GAPDHP62-201ENST00000515313 990 ntBASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 RNU6-1332P-201ENST00000516666 104 ntBASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 RNU6-307P-201ENST00000516743 106 ntBASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 CYCSP22-201ENST00000517555 339 ntBASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 AC090115.3-201ENST00000553218 849 ntBASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 AL049779.3-201ENST00000557141 606 ntBASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 MIR3941-201ENST00000582572 103 ntBASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 SDR42E1P2-201ENST00000614861 481 ntBASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 SDR42E1P4-201ENST00000620894 481 ntBASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LYSMD3Q7Z3D4 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LYSMD3Q7Z3D4 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms