Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
VPS13CQ709C8 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
VPS13CQ709C8 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
VPS13CQ709C8 AL022311.1-201ENST00000623726 19416 ntBASIC2.02□□□□□ -2.09
VPS13CQ709C8 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
VPS13CQ709C8 AC004987.3-201ENST00000413879 771 ntBASIC2.02□□□□□ -2.09
VPS13CQ709C8 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC2.02□□□□□ -2.09
VPS13CQ709C8 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS13CQ709C8 AC011037.1-201ENST00000483964 558 ntBASIC2.02□□□□□ -2.09
VPS13CQ709C8 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.02□□□□□ -2.09
VPS13CQ709C8 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS13CQ709C8 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS13CQ709C8 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VPS13CQ709C8 AC027514.1-201ENST00000588561 1603 ntBASIC2.02□□□□□ -2.09
VPS13CQ709C8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.02□□□□□ -2.09
VPS13CQ709C8 RNA5SP107-201ENST00000411358 122 ntBASIC2.02□□□□□ -2.09
VPS13CQ709C8 AC069218.2-201ENST00000411665 344 ntBASIC2.02□□□□□ -2.09
VPS13CQ709C8 MORF4L1P6-201ENST00000418771 268 ntBASIC2.02□□□□□ -2.09
VPS13CQ709C8 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VPS13CQ709C8 AC107222.1-201ENST00000510899 637 ntBASIC2.02□□□□□ -2.09
VPS13CQ709C8 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS13CQ709C8 AC096725.1-201ENST00000514266 313 ntBASIC2.02□□□□□ -2.09
VPS13CQ709C8 RANP3-201ENST00000530970 276 ntBASIC2.02□□□□□ -2.09
VPS13CQ709C8 SETP1-201ENST00000556014 845 ntBASIC2.02□□□□□ -2.09
VPS13CQ709C8 AP000919.1-202ENST00000581139 1264 ntBASIC2.02□□□□□ -2.09
VPS13CQ709C8 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
VPS13CQ709C8 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
VPS13CQ709C8 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
VPS13CQ709C8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
VPS13CQ709C8 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
VPS13CQ709C8 AC010881.1-201ENST00000433830 235 ntBASIC2.02□□□□□ -2.09
VPS13CQ709C8 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS13CQ709C8 AC006539.3-201ENST00000454258 129 ntBASIC2.02□□□□□ -2.09
VPS13CQ709C8 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS13CQ709C8 AC233280.2-201ENST00000603917 1070 ntBASIC2.02□□□□□ -2.09
VPS13CQ709C8 AL591416.1-201ENST00000404015 867 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 ZNF603P-201ENST00000405613 487 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS13CQ709C8 ATP5J2P3-201ENST00000451550 258 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 RPL30P9-201ENST00000465586 330 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 RPL23AP49-201ENST00000492925 468 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 HMGB1P19-201ENST00000517578 577 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 AL670379.6-201ENST00000603753 252 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 AL670379.11-201ENST00000604059 253 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 AL670379.10-201ENST00000604330 253 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 AC008162.1-201ENST00000604718 254 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 AL670379.1-201ENST00000604752 252 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 AL670379.2-201ENST00000604983 252 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 AL670379.5-201ENST00000605253 252 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 AL670379.4-201ENST00000605279 254 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 AL670379.12-201ENST00000605291 253 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 AL670379.8-201ENST00000605353 252 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 AL670379.9-201ENST00000605428 253 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 AL670379.7-201ENST00000605823 252 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
VPS13CQ709C8 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
VPS13CQ709C8 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
VPS13CQ709C8 AC007064.1-201ENST00000412238 351 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VPS13CQ709C8 AC006960.1-201ENST00000419980 153 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 NANOGP5-201ENST00000424456 877 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS13CQ709C8 SNRPGP9-201ENST00000456025 225 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS13CQ709C8 AP003385.6-201ENST00000531603 374 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS13CQ709C8 OR4U1P-201ENST00000554958 912 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 U4.3-201ENST00000621047 82 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 AC005539.1-201ENST00000443768 1479 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
VPS13CQ709C8 RPL21P75-201ENST00000396599 483 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 RPL21P1-201ENST00000399532 476 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 RPL21P28-201ENST00000401418 483 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 AL592114.1-201ENST00000403842 483 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 snoU13.18-201ENST00000459483 104 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 AC093278.1-201ENST00000494700 600 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 RPL21P16-201ENST00000495531 483 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
VPS13CQ709C8 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS13CQ709C8 AL109741.3-201ENST00000561748 592 ntBASIC2.01□□□□□ -2.09
VPS13CQ709C8 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.01□□□□□ -2.09
VPS13CQ709C8 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC2.01□□□□□ -2.09
VPS13CQ709C8 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
VPS13CQ709C8 RNU6-321P-201ENST00000410912 106 ntBASIC2□□□□□ -2.09
VPS13CQ709C8 AL139156.1-201ENST00000412785 841 ntBASIC2□□□□□ -2.09
VPS13CQ709C8 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VPS13CQ709C8 AP000526.1-201ENST00000603308 1388 ntBASIC2□□□□□ -2.09
VPS13CQ709C8 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
VPS13CQ709C8 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VPS13CQ709C8 Y_RNA.112-201ENST00000363250 102 ntBASIC2□□□□□ -2.09
VPS13CQ709C8 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2□□□□□ -2.09
VPS13CQ709C8 RPS15AP28-201ENST00000435088 386 ntBASIC2□□□□□ -2.09
VPS13CQ709C8 FAM60DP-201ENST00000524174 632 ntBASIC2□□□□□ -2.09
VPS13CQ709C8 TRAV11-201ENST00000539512 339 ntBASIC2□□□□□ -2.09
VPS13CQ709C8 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2□□□□□ -2.09
VPS13CQ709C8 AL355836.1-201ENST00000555951 870 ntBASIC2□□□□□ -2.09
VPS13CQ709C8 MIR4635-201ENST00000583759 79 ntBASIC2□□□□□ -2.09
VPS13CQ709C8 MTND5P28-201ENST00000438005 1594 ntBASIC2□□□□□ -2.09
VPS13CQ709C8 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC2□□□□□ -2.09
VPS13CQ709C8 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms