Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC010378.1-201ENST00000619270 362 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AC129915.3-201ENST00000634128 948 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AP000550.3-201ENST00000637734 379 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AC139426.3-201ENST00000605648 2059 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AC009962.1-201ENST00000567327 3813 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 AL359854.1-201ENST00000614203 1594 ntBASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.06□□□□□ -1.44
FOXR1Q6PIV2 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 RNA5SP346-201ENST00000363541 121 ntBASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 RNU1-115P-201ENST00000365329 160 ntBASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 RNY3P13-201ENST00000365542 102 ntBASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 Y_RNA.428-201ENST00000384078 102 ntBASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 RNU6-328P-201ENST00000390887 106 ntBASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 RNU6-1050P-201ENST00000410388 107 ntBASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 AC023141.3-201ENST00000436698 278 ntBASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 AL035551.1-201ENST00000446931 348 ntBASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 AL035090.1-201ENST00000454835 332 ntBASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 AL353752.1-201ENST00000454946 260 ntBASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 PCMTD1P1-201ENST00000455560 355 ntBASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 RN7SL643P-201ENST00000471845 291 ntBASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 RPL21P93-201ENST00000480465 489 ntBASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 RPS4XP14-201ENST00000493072 781 ntBASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 AC060775.1-201ENST00000518241 520 ntBASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 AP003396.4-201ENST00000527574 265 ntBASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 AC036111.2-201ENST00000533247 901 ntBASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 RPL21P12-201ENST00000559810 515 ntBASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 AC022884.3-201ENST00000579571 248 ntBASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 AC005332.4-201ENST00000592752 579 ntBASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 AC109309.2-201ENST00000612597 332 ntBASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 MIR6886-201ENST00000619864 61 ntBASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
FOXR1Q6PIV2 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 RNA5SP110-201ENST00000362638 115 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 RNU1-134P-201ENST00000362935 165 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 Y_RNA.376-201ENST00000365638 108 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 RNU6-713P-201ENST00000384761 107 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 RNA5SP178-201ENST00000410380 128 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 AC068533.1-201ENST00000418542 415 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 AC079355.1-201ENST00000421770 223 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 AL034379.1-201ENST00000423216 253 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 CHEK2P5-201ENST00000423877 246 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 RPL23AP89-201ENST00000439324 255 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 AC005297.2-201ENST00000450430 606 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 AC020893.1-201ENST00000502452 580 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 HMGB1P35-201ENST00000503360 598 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 AC114801.2-201ENST00000503825 781 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 AC116562.3-201ENST00000506136 177 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 RNA5SP503-201ENST00000517047 117 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 COX6B1P6-201ENST00000522347 255 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 IGHV3-76-201ENST00000522465 295 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 AC068587.5-201ENST00000528506 175 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms