Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC118273.2-201ENST00000532092 465 ntBASIC5.09□□□□□ -1.59
KRT40Q6A162 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
KRT40Q6A162 AC025884.1-201ENST00000556034 378 ntBASIC5.09□□□□□ -1.59
KRT40Q6A162 AC141257.3-201ENST00000572906 215 ntBASIC5.09□□□□□ -1.59
KRT40Q6A162 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC5.09□□□□□ -1.59
KRT40Q6A162 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.09□□□□□ -1.59
KRT40Q6A162 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.09□□□□□ -1.59
KRT40Q6A162 AC091488.1-201ENST00000604239 660 ntBASIC5.09□□□□□ -1.59
KRT40Q6A162 AP001521.1-201ENST00000609150 300 ntBASIC5.09□□□□□ -1.59
KRT40Q6A162 AC017083.3-201ENST00000609955 700 ntBASIC5.09□□□□□ -1.59
KRT40Q6A162 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
KRT40Q6A162 AC104010.1-201ENST00000616889 150 ntBASIC5.09□□□□□ -1.59
KRT40Q6A162 AL121890.2-201ENST00000617644 465 ntBASIC5.09□□□□□ -1.59
KRT40Q6A162 CR381653.2-201ENST00000624041 768 ntBASIC5.09□□□□□ -1.59
KRT40Q6A162 FAM157B-203ENST00000639350 358 ntBASIC5.09□□□□□ -1.59
KRT40Q6A162 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
KRT40Q6A162 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
KRT40Q6A162 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
KRT40Q6A162 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
KRT40Q6A162 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.6
KRT40Q6A162 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
KRT40Q6A162 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
KRT40Q6A162 AC090017.1-201ENST00000548612 1779 ntBASIC5.09□□□□□ -1.6
KRT40Q6A162 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.09□□□□□ -1.6
KRT40Q6A162 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRT40Q6A162 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
KRT40Q6A162 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.08□□□□□ -1.6
KRT40Q6A162 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
KRT40Q6A162 RNU6-251P-201ENST00000363235 104 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.08□□□□□ -1.6
KRT40Q6A162 RNU6-1122P-201ENST00000384449 107 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 RNU6-225P-201ENST00000384613 103 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 MIR181A1-201ENST00000385026 110 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
KRT40Q6A162 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.08□□□□□ -1.6
KRT40Q6A162 AL445189.1-201ENST00000405722 338 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 HMGB1P11-201ENST00000413899 637 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 HMGB3P23-201ENST00000414981 585 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.08□□□□□ -1.6
KRT40Q6A162 TMSB10P2-201ENST00000416049 131 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 AC245052.5-201ENST00000416320 649 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 AIMP1P1-201ENST00000418670 937 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.08□□□□□ -1.6
KRT40Q6A162 AL356583.2-201ENST00000426536 280 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.08□□□□□ -1.6
KRT40Q6A162 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRT40Q6A162 AC114495.1-201ENST00000441274 436 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 GDI2P2-201ENST00000445131 608 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.08□□□□□ -1.6
KRT40Q6A162 NDUFA5P7-201ENST00000452914 242 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 DHFRP3-201ENST00000455595 559 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.08□□□□□ -1.6
KRT40Q6A162 RPL23AP12-201ENST00000467573 473 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 FAM92A1P2-202ENST00000504766 877 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 PRDX4P1-201ENST00000507189 574 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.08□□□□□ -1.6
KRT40Q6A162 AC006499.2-201ENST00000513470 337 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 RNU6-314P-201ENST00000516574 104 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 IGLV3-26-201ENST00000520756 302 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.08□□□□□ -1.6
KRT40Q6A162 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRT40Q6A162 MIR5697-201ENST00000578045 78 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC5.08□□□□□ -1.6
KRT40Q6A162 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.08□□□□□ -1.6
KRT40Q6A162 AC103710.4-201ENST00000609301 899 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 AC012409.3-201ENST00000611343 981 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 AC131902.3-201ENST00000611767 581 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 AL138721.1-201ENST00000616756 179 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 AP005019.3-201ENST00000620418 560 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 AC034229.5-201ENST00000624258 185 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 AC112200.1-201ENST00000625015 234 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 CDRT1-208ENST00000630868 794 ntBASIC5.08□□□□□ -1.6
KRT40Q6A162 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRT40Q6A162 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.08□□□□□ -1.6
KRT40Q6A162 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.08□□□□□ -1.6
KRT40Q6A162 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRT40Q6A162 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
KRT40Q6A162 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRT40Q6A162 SCN1A-220ENST00000641603 12506 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRT40Q6A162 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRT40Q6A162 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
KRT40Q6A162 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
KRT40Q6A162 MIR208A-201ENST00000362287 71 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 RNA5SP387-201ENST00000364226 106 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 RNU5A-6P-201ENST00000384136 116 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 MIR506-201ENST00000384998 124 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 MIR3065-201ENST00000390137 79 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 HSPD1P16-201ENST00000402302 394 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KRT40Q6A162 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC5.07□□□□□ -1.6
KRT40Q6A162 USP9YP6-201ENST00000413550 854 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.07□□□□□ -1.6
KRT40Q6A162 ZYG11AP1-201ENST00000430329 837 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.07□□□□□ -1.6
KRT40Q6A162 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.07□□□□□ -1.6
KRT40Q6A162 PHBP16-201ENST00000446318 950 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 AC114755.5-201ENST00000447760 831 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms