Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VARS2Q5ST30 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.92□□□□□ -1.3
VARS2Q5ST30 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VARS2Q5ST30 AC016251.2-201ENST00000623393 3089 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VARS2Q5ST30 AC105114.1-201ENST00000624795 1862 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 AL139384.2-201ENST00000613809 3590 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VARS2Q5ST30 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VARS2Q5ST30 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VARS2Q5ST30 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
VARS2Q5ST30 CARF-203ENST00000414439 2099 ntTSL 2 BASIC6.91□□□□□ -1.3
VARS2Q5ST30 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VARS2Q5ST30 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
VARS2Q5ST30 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.91□□□□□ -1.3
VARS2Q5ST30 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VARS2Q5ST30 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VARS2Q5ST30 MIR649-201ENST00000384843 97 ntBASIC6.91□□□□□ -1.3
VARS2Q5ST30 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
VARS2Q5ST30 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.91□□□□□ -1.3
VARS2Q5ST30 AC096921.1-201ENST00000411661 375 ntBASIC6.91□□□□□ -1.3
VARS2Q5ST30 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.91□□□□□ -1.3
VARS2Q5ST30 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.91□□□□□ -1.3
VARS2Q5ST30 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC6.91□□□□□ -1.3
VARS2Q5ST30 AC006946.1-201ENST00000429106 328 ntBASIC6.91□□□□□ -1.3
VARS2Q5ST30 AL391987.1-201ENST00000441025 200 ntBASIC6.91□□□□□ -1.3
VARS2Q5ST30 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.91□□□□□ -1.3
VARS2Q5ST30 HMGN2P13-201ENST00000476476 274 ntBASIC6.91□□□□□ -1.3
VARS2Q5ST30 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.91□□□□□ -1.3
VARS2Q5ST30 AC063943.2-201ENST00000495697 534 ntBASIC6.91□□□□□ -1.3
VARS2Q5ST30 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VARS2Q5ST30 AC113155.1-201ENST00000511141 769 ntBASIC6.91□□□□□ -1.3
VARS2Q5ST30 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VARS2Q5ST30 AC025755.1-201ENST00000521306 278 ntBASIC6.91□□□□□ -1.3
VARS2Q5ST30 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.91□□□□□ -1.3
VARS2Q5ST30 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.91□□□□□ -1.3
VARS2Q5ST30 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.91□□□□□ -1.3
VARS2Q5ST30 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.91□□□□□ -1.3
VARS2Q5ST30 AC069234.4-201ENST00000621276 412 ntBASIC6.91□□□□□ -1.3
VARS2Q5ST30 CYP3A51P-201ENST00000633513 256 ntBASIC6.91□□□□□ -1.3
VARS2Q5ST30 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
VARS2Q5ST30 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VARS2Q5ST30 MTND5P32-201ENST00000560711 1802 ntBASIC6.91□□□□□ -1.3
VARS2Q5ST30 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
VARS2Q5ST30 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.91□□□□□ -1.3
VARS2Q5ST30 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VARS2Q5ST30 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
VARS2Q5ST30 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
VARS2Q5ST30 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
VARS2Q5ST30 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VARS2Q5ST30 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.91□□□□□ -1.3
VARS2Q5ST30 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.91□□□□□ -1.3
VARS2Q5ST30 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
VARS2Q5ST30 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
VARS2Q5ST30 CASC19-228ENST00000641414 1684 ntBASIC6.9□□□□□ -1.3
VARS2Q5ST30 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
VARS2Q5ST30 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.9□□□□□ -1.3
VARS2Q5ST30 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
VARS2Q5ST30 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
VARS2Q5ST30 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
VARS2Q5ST30 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
VARS2Q5ST30 RNU6-312P-201ENST00000364629 107 ntBASIC6.9□□□□□ -1.3
VARS2Q5ST30 RNU6-476P-201ENST00000384726 107 ntBASIC6.9□□□□□ -1.3
VARS2Q5ST30 RN7SKP281-201ENST00000410472 352 ntBASIC6.9□□□□□ -1.3
VARS2Q5ST30 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC6.9□□□□□ -1.3
VARS2Q5ST30 AC079809.1-201ENST00000415468 276 ntBASIC6.9□□□□□ -1.3
VARS2Q5ST30 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.9□□□□□ -1.3
VARS2Q5ST30 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
VARS2Q5ST30 AC011742.1-201ENST00000431448 434 ntBASIC6.9□□□□□ -1.3
VARS2Q5ST30 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.9□□□□□ -1.3
VARS2Q5ST30 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.9□□□□□ -1.3
VARS2Q5ST30 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.9□□□□□ -1.3
VARS2Q5ST30 AC010326.1-201ENST00000462726 602 ntBASIC6.9□□□□□ -1.3
VARS2Q5ST30 AC083906.1-201ENST00000509298 406 ntBASIC6.9□□□□□ -1.3
VARS2Q5ST30 ZNF519P4-201ENST00000514008 125 ntBASIC6.9□□□□□ -1.3
VARS2Q5ST30 AC087369.1-201ENST00000520775 996 ntBASIC6.9□□□□□ -1.3
VARS2Q5ST30 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC6.9□□□□□ -1.3
VARS2Q5ST30 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC6.9□□□□□ -1.3
VARS2Q5ST30 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.9□□□□□ -1.3
VARS2Q5ST30 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.9□□□□□ -1.3
VARS2Q5ST30 AC240442.1-201ENST00000616055 283 ntBASIC6.9□□□□□ -1.3
VARS2Q5ST30 MIR6811-201ENST00000620409 58 ntBASIC6.9□□□□□ -1.3
VARS2Q5ST30 AP001264.1-201ENST00000620602 703 ntBASIC6.9□□□□□ -1.3
VARS2Q5ST30 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.9□□□□□ -1.3
VARS2Q5ST30 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.9□□□□□ -1.3
VARS2Q5ST30 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
VARS2Q5ST30 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
VARS2Q5ST30 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.9□□□□□ -1.3
VARS2Q5ST30 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
VARS2Q5ST30 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
VARS2Q5ST30 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
VARS2Q5ST30 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.9□□□□□ -1.31
VARS2Q5ST30 SHQ1P1-201ENST00000437111 1544 ntBASIC6.9□□□□□ -1.31
VARS2Q5ST30 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
VARS2Q5ST30 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
VARS2Q5ST30 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
VARS2Q5ST30 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
VARS2Q5ST30 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VARS2Q5ST30 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms