Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CCDC38Q502W7 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.46□□□□□ -1.69
CCDC38Q502W7 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.46□□□□□ -1.69
CCDC38Q502W7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
CCDC38Q502W7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.46□□□□□ -1.69
CCDC38Q502W7 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC38Q502W7 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC38Q502W7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC38Q502W7 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 AC244517.1-201ENST00000606030 2086 ntBASIC4.46□□□□□ -1.7
CCDC38Q502W7 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 RNU6-1249P-201ENST00000363237 111 ntBASIC4.46□□□□□ -1.7
CCDC38Q502W7 RNU6-343P-201ENST00000364709 104 ntBASIC4.46□□□□□ -1.7
CCDC38Q502W7 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC38Q502W7 MIR320C1-201ENST00000408566 88 ntBASIC4.46□□□□□ -1.7
CCDC38Q502W7 RN7SKP177-201ENST00000410567 355 ntBASIC4.46□□□□□ -1.7
CCDC38Q502W7 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 AL513174.1-201ENST00000423182 629 ntBASIC4.46□□□□□ -1.7
CCDC38Q502W7 RPEP3-201ENST00000425462 676 ntBASIC4.46□□□□□ -1.7
CCDC38Q502W7 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 AL117351.1-201ENST00000438864 766 ntBASIC4.46□□□□□ -1.7
CCDC38Q502W7 H2AFZP6-201ENST00000444403 394 ntBASIC4.46□□□□□ -1.7
CCDC38Q502W7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 FABP3P2-201ENST00000453169 399 ntBASIC4.46□□□□□ -1.7
CCDC38Q502W7 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 BTF3P5-201ENST00000457252 467 ntBASIC4.46□□□□□ -1.7
CCDC38Q502W7 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 RPS4XP10-201ENST00000465034 731 ntBASIC4.46□□□□□ -1.7
CCDC38Q502W7 RPL23AP72-201ENST00000492447 435 ntBASIC4.46□□□□□ -1.7
CCDC38Q502W7 AC023424.2-201ENST00000493479 777 ntBASIC4.46□□□□□ -1.7
CCDC38Q502W7 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 AC005178.1-201ENST00000508392 440 ntBASIC4.46□□□□□ -1.7
CCDC38Q502W7 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 AC091515.1-201ENST00000548110 679 ntBASIC4.46□□□□□ -1.7
CCDC38Q502W7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 AC141257.3-201ENST00000572906 215 ntBASIC4.46□□□□□ -1.7
CCDC38Q502W7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 AL451044.1-201ENST00000604867 238 ntBASIC4.46□□□□□ -1.7
CCDC38Q502W7 AC011816.2-201ENST00000607089 556 ntBASIC4.46□□□□□ -1.7
CCDC38Q502W7 MIR6780A-201ENST00000615089 68 ntBASIC4.46□□□□□ -1.7
CCDC38Q502W7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC38Q502W7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC38Q502W7 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC38Q502W7 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCDC38Q502W7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC38Q502W7 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC38Q502W7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC38Q502W7 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC38Q502W7 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC38Q502W7 RNA5SP322-201ENST00000363617 119 ntBASIC4.45□□□□□ -1.7
CCDC38Q502W7 RNU6-289P-201ENST00000364093 107 ntBASIC4.45□□□□□ -1.7
CCDC38Q502W7 RNVU1-6-201ENST00000364688 164 ntBASIC4.45□□□□□ -1.7
CCDC38Q502W7 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC38Q502W7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCDC38Q502W7 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC38Q502W7 AC245052.5-201ENST00000416320 649 ntBASIC4.45□□□□□ -1.7
CCDC38Q502W7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC38Q502W7 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC38Q502W7 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC38Q502W7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC38Q502W7 AC114495.1-201ENST00000441274 436 ntBASIC4.45□□□□□ -1.7
CCDC38Q502W7 MTATP6P26-201ENST00000445926 662 ntBASIC4.45□□□□□ -1.7
CCDC38Q502W7 RPL7P52-201ENST00000449200 742 ntBASIC4.45□□□□□ -1.7
CCDC38Q502W7 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC38Q502W7 AP000873.1-201ENST00000463987 400 ntBASIC4.45□□□□□ -1.7
CCDC38Q502W7 AC053481.1-201ENST00000467217 306 ntBASIC4.45□□□□□ -1.7
CCDC38Q502W7 AP000926.1-201ENST00000479573 241 ntBASIC4.45□□□□□ -1.7
CCDC38Q502W7 AC078817.1-201ENST00000492623 435 ntBASIC4.45□□□□□ -1.7
CCDC38Q502W7 AC112198.1-201ENST00000505369 1220 ntBASIC4.45□□□□□ -1.7
CCDC38Q502W7 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC38Q502W7 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC38Q502W7 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC38Q502W7 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC38Q502W7 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC38Q502W7 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC38Q502W7 MTND5P4-201ENST00000514978 288 ntBASIC4.45□□□□□ -1.7
CCDC38Q502W7 RNU6-759P-201ENST00000516740 103 ntBASIC4.45□□□□□ -1.7
CCDC38Q502W7 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC38Q502W7 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC38Q502W7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC38Q502W7 AL353997.4-201ENST00000586196 166 ntBASIC4.45□□□□□ -1.7
CCDC38Q502W7 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC38Q502W7 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC38Q502W7 AL163642.2-201ENST00000604722 1019 ntBASIC4.45□□□□□ -1.7
CCDC38Q502W7 AC018755.4-201ENST00000619715 454 ntBASIC4.45□□□□□ -1.7
CCDC38Q502W7 AC009039.2-201ENST00000624524 529 ntBASIC4.45□□□□□ -1.7
CCDC38Q502W7 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC38Q502W7 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms