Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RFX7Q2KHR2 RNU6-859P-201ENST00000362728 107 ntBASIC3.35□□□□□ -1.87
RFX7Q2KHR2 RNA5SP105-201ENST00000391123 113 ntBASIC3.35□□□□□ -1.87
RFX7Q2KHR2 AL031679.1-201ENST00000400616 525 ntBASIC3.35□□□□□ -1.87
RFX7Q2KHR2 AL138827.1-201ENST00000402666 306 ntBASIC3.35□□□□□ -1.87
RFX7Q2KHR2 HSPE1P26-201ENST00000405341 275 ntBASIC3.35□□□□□ -1.87
RFX7Q2KHR2 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.35□□□□□ -1.87
RFX7Q2KHR2 NDUFB4P5-201ENST00000415445 361 ntBASIC3.35□□□□□ -1.87
RFX7Q2KHR2 TRGV6-201ENST00000417928 299 ntBASIC3.35□□□□□ -1.87
RFX7Q2KHR2 SDCBPP3-201ENST00000419629 891 ntBASIC3.35□□□□□ -1.87
RFX7Q2KHR2 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.35□□□□□ -1.87
RFX7Q2KHR2 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.35□□□□□ -1.87
RFX7Q2KHR2 RNU6-1218P-201ENST00000458990 108 ntBASIC3.35□□□□□ -1.87
RFX7Q2KHR2 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.35□□□□□ -1.87
RFX7Q2KHR2 RNU4-29P-201ENST00000515943 174 ntBASIC3.35□□□□□ -1.87
RFX7Q2KHR2 AL512310.1-201ENST00000548639 172 ntBASIC3.35□□□□□ -1.87
RFX7Q2KHR2 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.35□□□□□ -1.87
RFX7Q2KHR2 RPL23AP92-201ENST00000603609 255 ntBASIC3.35□□□□□ -1.87
RFX7Q2KHR2 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.35□□□□□ -1.87
RFX7Q2KHR2 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.35□□□□□ -1.87
RFX7Q2KHR2 AC138649.5-201ENST00000637456 137 ntBASIC3.35□□□□□ -1.87
RFX7Q2KHR2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RFX7Q2KHR2 RNU4-82P-201ENST00000362443 140 ntBASIC3.34□□□□□ -1.88
RFX7Q2KHR2 RNU4-7P-201ENST00000364758 141 ntBASIC3.34□□□□□ -1.88
RFX7Q2KHR2 RNU6-225P-201ENST00000384613 103 ntBASIC3.34□□□□□ -1.88
RFX7Q2KHR2 RNU2-52P-201ENST00000410680 190 ntBASIC3.34□□□□□ -1.88
RFX7Q2KHR2 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.34□□□□□ -1.88
RFX7Q2KHR2 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.34□□□□□ -1.88
RFX7Q2KHR2 Z93242.1-201ENST00000427102 353 ntBASIC3.34□□□□□ -1.88
RFX7Q2KHR2 AC073508.1-201ENST00000428866 656 ntBASIC3.34□□□□□ -1.88
RFX7Q2KHR2 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.34□□□□□ -1.88
RFX7Q2KHR2 RPL23AP11-201ENST00000475260 469 ntBASIC3.34□□□□□ -1.88
RFX7Q2KHR2 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.34□□□□□ -1.88
RFX7Q2KHR2 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.34□□□□□ -1.88
RFX7Q2KHR2 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.34□□□□□ -1.88
RFX7Q2KHR2 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.34□□□□□ -1.88
RFX7Q2KHR2 OR4H12P-201ENST00000556269 907 ntBASIC3.34□□□□□ -1.88
RFX7Q2KHR2 AC069234.5-201ENST00000611056 416 ntBASIC3.34□□□□□ -1.88
RFX7Q2KHR2 CR381653.2-201ENST00000624041 768 ntBASIC3.34□□□□□ -1.88
RFX7Q2KHR2 AC048347.1-201ENST00000624621 427 ntBASIC3.34□□□□□ -1.88
RFX7Q2KHR2 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
RFX7Q2KHR2 AL359693.1-201ENST00000614959 2407 ntBASIC3.33□□□□□ -1.88
RFX7Q2KHR2 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.33□□□□□ -1.88
RFX7Q2KHR2 RPL9P7-201ENST00000330965 580 ntBASIC3.33□□□□□ -1.88
RFX7Q2KHR2 MIR591-201ENST00000385290 95 ntBASIC3.33□□□□□ -1.88
RFX7Q2KHR2 MIR1261-201ENST00000408659 82 ntBASIC3.33□□□□□ -1.88
RFX7Q2KHR2 UBE2V2P1-201ENST00000434717 398 ntBASIC3.33□□□□□ -1.88
RFX7Q2KHR2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.33□□□□□ -1.88
RFX7Q2KHR2 RPL23AP31-201ENST00000456160 467 ntBASIC3.33□□□□□ -1.88
RFX7Q2KHR2 RPL21P18-201ENST00000469899 480 ntBASIC3.33□□□□□ -1.88
RFX7Q2KHR2 AC090525.1-201ENST00000479116 478 ntBASIC3.33□□□□□ -1.88
RFX7Q2KHR2 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.33□□□□□ -1.88
RFX7Q2KHR2 AP001207.1-201ENST00000524051 481 ntBASIC3.33□□□□□ -1.88
RFX7Q2KHR2 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.33□□□□□ -1.88
RFX7Q2KHR2 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.33□□□□□ -1.88
RFX7Q2KHR2 ZNF861P-201ENST00000588126 639 ntBASIC3.33□□□□□ -1.88
RFX7Q2KHR2 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.33□□□□□ -1.88
RFX7Q2KHR2 AC231759.1-201ENST00000616455 597 ntBASIC3.33□□□□□ -1.88
RFX7Q2KHR2 AP004607.9-201ENST00000618202 316 ntBASIC3.33□□□□□ -1.88
RFX7Q2KHR2 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RFX7Q2KHR2 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
RFX7Q2KHR2 ASNSP3-201ENST00000451989 1306 ntBASIC3.33□□□□□ -1.88
RFX7Q2KHR2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RFX7Q2KHR2 TAB3P1-202ENST00000452645 1634 ntBASIC3.32□□□□□ -1.88
RFX7Q2KHR2 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.32□□□□□ -1.88
RFX7Q2KHR2 AC009487.2-201ENST00000420969 6821 ntBASIC3.32□□□□□ -1.88
RFX7Q2KHR2 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.32□□□□□ -1.88
RFX7Q2KHR2 AC007336.1-201ENST00000576365 3828 ntBASIC3.32□□□□□ -1.88
RFX7Q2KHR2 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.32□□□□□ -1.88
RFX7Q2KHR2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RFX7Q2KHR2 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RFX7Q2KHR2 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
RFX7Q2KHR2 AL445529.1-201ENST00000398713 389 ntBASIC3.32□□□□□ -1.88
RFX7Q2KHR2 RNA5SP129-201ENST00000410276 118 ntBASIC3.32□□□□□ -1.88
RFX7Q2KHR2 AL590399.6-201ENST00000446396 307 ntBASIC3.32□□□□□ -1.88
RFX7Q2KHR2 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.32□□□□□ -1.88
RFX7Q2KHR2 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.32□□□□□ -1.88
RFX7Q2KHR2 AC126389.1-201ENST00000477436 290 ntBASIC3.32□□□□□ -1.88
RFX7Q2KHR2 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
RFX7Q2KHR2 AC010265.1-201ENST00000513509 211 ntBASIC3.32□□□□□ -1.88
RFX7Q2KHR2 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.32□□□□□ -1.88
RFX7Q2KHR2 AC008277.2-201ENST00000605196 797 ntBASIC3.32□□□□□ -1.88
RFX7Q2KHR2 AC004832.5-201ENST00000608677 401 ntBASIC3.32□□□□□ -1.88
RFX7Q2KHR2 AC107871.2-201ENST00000612894 502 ntBASIC3.32□□□□□ -1.88
RFX7Q2KHR2 AC123768.4-201ENST00000616244 701 ntBASIC3.32□□□□□ -1.88
RFX7Q2KHR2 AL589935.2-201ENST00000616471 1231 ntBASIC3.32□□□□□ -1.88
RFX7Q2KHR2 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RFX7Q2KHR2 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.32□□□□□ -1.88
RFX7Q2KHR2 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RFX7Q2KHR2 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
RFX7Q2KHR2 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RFX7Q2KHR2 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RFX7Q2KHR2 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.31□□□□□ -1.88
RFX7Q2KHR2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RFX7Q2KHR2 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RFX7Q2KHR2 SNORD88.1-201ENST00000408684 91 ntBASIC3.31□□□□□ -1.88
RFX7Q2KHR2 RNU2-6P-201ENST00000411404 190 ntBASIC3.31□□□□□ -1.88
RFX7Q2KHR2 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.31□□□□□ -1.88
RFX7Q2KHR2 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC3.31□□□□□ -1.88
RFX7Q2KHR2 AC112220.1-201ENST00000434628 355 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms