Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 RNU6-253P-201ENST00000384730 105 ntBASIC2.46□□□□□ -2.02
CACNA1EQ15878 MIR7-2-201ENST00000384970 110 ntBASIC2.46□□□□□ -2.02
CACNA1EQ15878 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.46□□□□□ -2.02
CACNA1EQ15878 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.46□□□□□ -2.02
CACNA1EQ15878 RPL21P99-201ENST00000480369 423 ntBASIC2.46□□□□□ -2.02
CACNA1EQ15878 AC016687.1-201ENST00000482574 353 ntBASIC2.46□□□□□ -2.02
CACNA1EQ15878 RPL9P6-201ENST00000492764 598 ntBASIC2.46□□□□□ -2.02
CACNA1EQ15878 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.46□□□□□ -2.02
CACNA1EQ15878 AC093278.1-201ENST00000494700 600 ntBASIC2.46□□□□□ -2.02
CACNA1EQ15878 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.46□□□□□ -2.02
CACNA1EQ15878 AC131238.1-201ENST00000617135 328 ntBASIC2.46□□□□□ -2.02
CACNA1EQ15878 AL606537.1-201ENST00000607258 2011 ntBASIC2.46□□□□□ -2.02
CACNA1EQ15878 MTND4P10-201ENST00000446199 1363 ntBASIC2.46□□□□□ -2.02
CACNA1EQ15878 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC2.46□□□□□ -2.02
CACNA1EQ15878 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CACNA1EQ15878 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CACNA1EQ15878 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.46□□□□□ -2.02
CACNA1EQ15878 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.46□□□□□ -2.02
CACNA1EQ15878 AC048351.1-201ENST00000420064 602 ntBASIC2.46□□□□□ -2.02
CACNA1EQ15878 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC2.46□□□□□ -2.02
CACNA1EQ15878 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.46□□□□□ -2.02
CACNA1EQ15878 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.46□□□□□ -2.02
CACNA1EQ15878 AC108471.1-201ENST00000513977 287 ntBASIC2.46□□□□□ -2.02
CACNA1EQ15878 AP001317.1-201ENST00000531194 960 ntBASIC2.46□□□□□ -2.02
CACNA1EQ15878 AC005046.1-201ENST00000608515 625 ntBASIC2.46□□□□□ -2.02
CACNA1EQ15878 U4.3-201ENST00000621047 82 ntBASIC2.46□□□□□ -2.02
CACNA1EQ15878 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.46□□□□□ -2.02
CACNA1EQ15878 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CACNA1EQ15878 AC022031.1-201ENST00000585985 2593 ntBASIC2.45□□□□□ -2.02
CACNA1EQ15878 AL353746.1-201ENST00000566293 6881 ntBASIC2.45□□□□□ -2.02
CACNA1EQ15878 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.45□□□□□ -2.02
CACNA1EQ15878 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CACNA1EQ15878 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
CACNA1EQ15878 Z98742.3-201ENST00000418637 326 ntBASIC2.45□□□□□ -2.02
CACNA1EQ15878 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.45□□□□□ -2.02
CACNA1EQ15878 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.45□□□□□ -2.02
CACNA1EQ15878 UBE2V2P4-201ENST00000447495 259 ntBASIC2.45□□□□□ -2.02
CACNA1EQ15878 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.45□□□□□ -2.02
CACNA1EQ15878 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.45□□□□□ -2.02
CACNA1EQ15878 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.45□□□□□ -2.02
CACNA1EQ15878 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CACNA1EQ15878 OR4G2P-202ENST00000641004 1759 ntBASIC2.45□□□□□ -2.02
CACNA1EQ15878 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CACNA1EQ15878 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CACNA1EQ15878 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CACNA1EQ15878 Y_RNA.140-201ENST00000363474 103 ntBASIC2.45□□□□□ -2.02
CACNA1EQ15878 RNU1-73P-201ENST00000383971 164 ntBASIC2.45□□□□□ -2.02
CACNA1EQ15878 EIF5P1-201ENST00000400019 1231 ntBASIC2.45□□□□□ -2.02
CACNA1EQ15878 RNU2-22P-201ENST00000411266 212 ntBASIC2.45□□□□□ -2.02
CACNA1EQ15878 AL451074.5-201ENST00000415894 435 ntBASIC2.45□□□□□ -2.02
CACNA1EQ15878 RN7SL499P-201ENST00000481141 276 ntBASIC2.45□□□□□ -2.02
CACNA1EQ15878 AC011037.1-201ENST00000483964 558 ntBASIC2.45□□□□□ -2.02
CACNA1EQ15878 AC008716.1-201ENST00000511084 513 ntBASIC2.45□□□□□ -2.02
CACNA1EQ15878 AC090281.1-201ENST00000523019 276 ntBASIC2.45□□□□□ -2.02
CACNA1EQ15878 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.45□□□□□ -2.02
CACNA1EQ15878 CRYM-AS1-204ENST00000637983 556 ntBASIC2.45□□□□□ -2.02
CACNA1EQ15878 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
CACNA1EQ15878 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.44□□□□□ -2.02
CACNA1EQ15878 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.44□□□□□ -2.02
CACNA1EQ15878 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.44□□□□□ -2.02
CACNA1EQ15878 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CACNA1EQ15878 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.44□□□□□ -2.02
CACNA1EQ15878 RPL7P10-201ENST00000417407 739 ntBASIC2.44□□□□□ -2.02
CACNA1EQ15878 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC2.44□□□□□ -2.02
CACNA1EQ15878 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
CACNA1EQ15878 RPL23AP45-201ENST00000476406 468 ntBASIC2.44□□□□□ -2.02
CACNA1EQ15878 AC112184.1-201ENST00000505179 312 ntBASIC2.44□□□□□ -2.02
CACNA1EQ15878 AC112673.1-201ENST00000513168 575 ntBASIC2.44□□□□□ -2.02
CACNA1EQ15878 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.44□□□□□ -2.02
CACNA1EQ15878 RN7SKP24-201ENST00000515888 284 ntBASIC2.44□□□□□ -2.02
CACNA1EQ15878 RNU6-548P-201ENST00000517083 115 ntBASIC2.44□□□□□ -2.02
CACNA1EQ15878 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
CACNA1EQ15878 AC015712.3-201ENST00000559380 164 ntBASIC2.44□□□□□ -2.02
CACNA1EQ15878 HMGB3P26-201ENST00000560051 582 ntBASIC2.44□□□□□ -2.02
CACNA1EQ15878 AADACP1-206ENST00000561502 1193 ntBASIC2.44□□□□□ -2.02
CACNA1EQ15878 RPL23AP84-201ENST00000571193 464 ntBASIC2.44□□□□□ -2.02
CACNA1EQ15878 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.44□□□□□ -2.02
CACNA1EQ15878 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.44□□□□□ -2.02
CACNA1EQ15878 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC2.44□□□□□ -2.02
CACNA1EQ15878 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
CACNA1EQ15878 MIR489-201ENST00000384923 84 ntBASIC2.43□□□□□ -2.02
CACNA1EQ15878 AL355379.1-201ENST00000405542 640 ntBASIC2.43□□□□□ -2.02
CACNA1EQ15878 SNORA79B-201ENST00000410557 148 ntBASIC2.43□□□□□ -2.02
CACNA1EQ15878 AC018634.1-201ENST00000437554 401 ntBASIC2.43□□□□□ -2.02
CACNA1EQ15878 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CACNA1EQ15878 HMGN2P23-201ENST00000456759 269 ntBASIC2.43□□□□□ -2.02
CACNA1EQ15878 AC234781.5-201ENST00000508429 271 ntBASIC2.43□□□□□ -2.02
CACNA1EQ15878 AC107222.1-201ENST00000510899 637 ntBASIC2.43□□□□□ -2.02
CACNA1EQ15878 CKS1BP7-201ENST00000522230 235 ntBASIC2.43□□□□□ -2.02
CACNA1EQ15878 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.43□□□□□ -2.02
CACNA1EQ15878 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.43□□□□□ -2.02
CACNA1EQ15878 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.43□□□□□ -2.02
CACNA1EQ15878 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.43□□□□□ -2.02
CACNA1EQ15878 AC011492.1-201ENST00000600023 315 ntBASIC2.43□□□□□ -2.02
CACNA1EQ15878 AC007423.1-201ENST00000605009 627 ntBASIC2.43□□□□□ -2.02
CACNA1EQ15878 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CACNA1EQ15878 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
CACNA1EQ15878 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CACNA1EQ15878 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CACNA1EQ15878 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms