Protein–RNA interactions for Protein: Q02880

TOP2B, DNA topoisomerase 2-beta, humanhuman

Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2BQ02880 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.21□□□□□ -1.73
TOP2BQ02880 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.21□□□□□ -1.73
TOP2BQ02880 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.21□□□□□ -1.73
TOP2BQ02880 AC007423.1-201ENST00000605009 627 ntBASIC4.21□□□□□ -1.73
TOP2BQ02880 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
TOP2BQ02880 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
TOP2BQ02880 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.21□□□□□ -1.73
TOP2BQ02880 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TOP2BQ02880 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC4.21□□□□□ -1.74
TOP2BQ02880 RNU6-76P-201ENST00000384060 104 ntBASIC4.21□□□□□ -1.74
TOP2BQ02880 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.21□□□□□ -1.74
TOP2BQ02880 AC124916.1-201ENST00000444020 547 ntBASIC4.21□□□□□ -1.74
TOP2BQ02880 HMGN1P5-201ENST00000448591 263 ntBASIC4.21□□□□□ -1.74
TOP2BQ02880 HMGB3P8-201ENST00000449709 577 ntBASIC4.21□□□□□ -1.74
TOP2BQ02880 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.21□□□□□ -1.74
TOP2BQ02880 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.21□□□□□ -1.74
TOP2BQ02880 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.21□□□□□ -1.74
TOP2BQ02880 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.21□□□□□ -1.74
TOP2BQ02880 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.21□□□□□ -1.74
TOP2BQ02880 YWHAZP1-201ENST00000556286 722 ntBASIC4.21□□□□□ -1.74
TOP2BQ02880 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.21□□□□□ -1.74
TOP2BQ02880 SNORA35B-201ENST00000607417 129 ntBASIC4.21□□□□□ -1.74
TOP2BQ02880 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.21□□□□□ -1.74
TOP2BQ02880 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC4.21□□□□□ -1.74
TOP2BQ02880 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.21□□□□□ -1.74
TOP2BQ02880 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC4.21□□□□□ -1.74
TOP2BQ02880 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
TOP2BQ02880 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.2□□□□□ -1.74
TOP2BQ02880 AC069218.2-201ENST00000411665 344 ntBASIC4.2□□□□□ -1.74
TOP2BQ02880 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.2□□□□□ -1.74
TOP2BQ02880 RPL23AP70-201ENST00000483361 460 ntBASIC4.2□□□□□ -1.74
TOP2BQ02880 RN7SL636P-201ENST00000497504 294 ntBASIC4.2□□□□□ -1.74
TOP2BQ02880 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.2□□□□□ -1.74
TOP2BQ02880 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.2□□□□□ -1.74
TOP2BQ02880 AC055876.1-202ENST00000567053 138 ntBASIC4.2□□□□□ -1.74
TOP2BQ02880 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.2□□□□□ -1.74
TOP2BQ02880 AL137014.1-201ENST00000420490 1226 ntBASIC4.19□□□□□ -1.74
TOP2BQ02880 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.19□□□□□ -1.74
TOP2BQ02880 AC108471.1-201ENST00000513977 287 ntBASIC4.19□□□□□ -1.74
TOP2BQ02880 OR4A45P-201ENST00000529954 901 ntBASIC4.19□□□□□ -1.74
TOP2BQ02880 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.19□□□□□ -1.74
TOP2BQ02880 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.19□□□□□ -1.74
TOP2BQ02880 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TOP2BQ02880 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.19□□□□□ -1.74
TOP2BQ02880 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.19□□□□□ -1.74
TOP2BQ02880 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
TOP2BQ02880 OR4G1P-202ENST00000641173 1788 ntBASIC4.19□□□□□ -1.74
TOP2BQ02880 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.19□□□□□ -1.74
TOP2BQ02880 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.18□□□□□ -1.74
TOP2BQ02880 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC4.18□□□□□ -1.74
TOP2BQ02880 OR2B8P-201ENST00000432841 938 ntBASIC4.18□□□□□ -1.74
TOP2BQ02880 AC126182.1-201ENST00000478134 357 ntBASIC4.18□□□□□ -1.74
TOP2BQ02880 OR9N1P-201ENST00000491296 333 ntBASIC4.18□□□□□ -1.74
TOP2BQ02880 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.18□□□□□ -1.74
TOP2BQ02880 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC4.18□□□□□ -1.74
TOP2BQ02880 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.18□□□□□ -1.74
TOP2BQ02880 AL353997.5-201ENST00000618886 171 ntBASIC4.18□□□□□ -1.74
TOP2BQ02880 AC009487.4-201ENST00000624969 3585 ntBASIC4.18□□□□□ -1.74
TOP2BQ02880 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
TOP2BQ02880 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.18□□□□□ -1.74
TOP2BQ02880 AL021368.2-201ENST00000606125 5352 ntBASIC4.17□□□□□ -1.74
TOP2BQ02880 SNORD114-1-201ENST00000362705 72 ntBASIC4.17□□□□□ -1.74
TOP2BQ02880 AL356806.1-201ENST00000422524 916 ntBASIC4.17□□□□□ -1.74
TOP2BQ02880 RPS12P2-201ENST00000439728 269 ntBASIC4.17□□□□□ -1.74
TOP2BQ02880 AC011816.1-201ENST00000441346 546 ntBASIC4.17□□□□□ -1.74
TOP2BQ02880 HMGN2P23-201ENST00000456759 269 ntBASIC4.17□□□□□ -1.74
TOP2BQ02880 RPL23AP11-201ENST00000475260 469 ntBASIC4.17□□□□□ -1.74
TOP2BQ02880 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.17□□□□□ -1.74
TOP2BQ02880 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.17□□□□□ -1.74
TOP2BQ02880 AP001004.1-201ENST00000582468 324 ntBASIC4.17□□□□□ -1.74
TOP2BQ02880 AC007938.3-201ENST00000604965 623 ntBASIC4.17□□□□□ -1.74
TOP2BQ02880 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
TOP2BQ02880 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TOP2BQ02880 EI24P2-201ENST00000397776 1076 ntBASIC4.17□□□□□ -1.74
TOP2BQ02880 AL353705.4-201ENST00000449661 238 ntBASIC4.17□□□□□ -1.74
TOP2BQ02880 RN7SL297P-201ENST00000483161 293 ntBASIC4.17□□□□□ -1.74
TOP2BQ02880 AC021146.5-201ENST00000503544 545 ntBASIC4.17□□□□□ -1.74
TOP2BQ02880 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.17□□□□□ -1.74
TOP2BQ02880 SNORA31.1-201ENST00000515993 133 ntBASIC4.17□□□□□ -1.74
TOP2BQ02880 SNORA31.5-201ENST00000516190 133 ntBASIC4.17□□□□□ -1.74
TOP2BQ02880 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.17□□□□□ -1.74
TOP2BQ02880 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.17□□□□□ -1.74
TOP2BQ02880 AC022960.2-201ENST00000616300 666 ntBASIC4.17□□□□□ -1.74
TOP2BQ02880 FRG1DP-201ENST00000635586 771 ntBASIC4.17□□□□□ -1.74
TOP2BQ02880 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.17□□□□□ -1.74
TOP2BQ02880 AC005539.1-201ENST00000443768 1479 ntBASIC4.16□□□□□ -1.74
TOP2BQ02880 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TOP2BQ02880 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
TOP2BQ02880 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TOP2BQ02880 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.16□□□□□ -1.74
TOP2BQ02880 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.16□□□□□ -1.74
TOP2BQ02880 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
TOP2BQ02880 AC002543.1-201ENST00000299783 1954 ntBASIC4.16□□□□□ -1.74
TOP2BQ02880 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TOP2BQ02880 RPL9P7-201ENST00000330965 580 ntBASIC4.16□□□□□ -1.74
TOP2BQ02880 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TOP2BQ02880 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC4.16□□□□□ -1.74
TOP2BQ02880 FAM103A2P-201ENST00000444122 354 ntBASIC4.16□□□□□ -1.74
TOP2BQ02880 AC008280.2-201ENST00000455473 307 ntBASIC4.16□□□□□ -1.74
TOP2BQ02880 RPL23AP14-201ENST00000468281 468 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 314.9 ms