Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.72□□□□□ -1.97
H3F3AP84243 MRPL50P2-201ENST00000416821 482 ntBASIC2.72□□□□□ -1.97
H3F3AP84243 HSPE1P1-201ENST00000421494 318 ntBASIC2.72□□□□□ -1.97
H3F3AP84243 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.72□□□□□ -1.97
H3F3AP84243 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.72□□□□□ -1.97
H3F3AP84243 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.72□□□□□ -1.97
H3F3AP84243 RPL17P49-201ENST00000443728 411 ntBASIC2.72□□□□□ -1.97
H3F3AP84243 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.72□□□□□ -1.97
H3F3AP84243 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.72□□□□□ -1.97
H3F3AP84243 RPL21P18-201ENST00000469899 480 ntBASIC2.72□□□□□ -1.97
H3F3AP84243 MTCO3P35-201ENST00000485582 781 ntBASIC2.72□□□□□ -1.97
H3F3AP84243 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.72□□□□□ -1.97
H3F3AP84243 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
H3F3AP84243 AP004371.1-201ENST00000525240 214 ntBASIC2.72□□□□□ -1.97
H3F3AP84243 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.72□□□□□ -1.97
H3F3AP84243 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.72□□□□□ -1.97
H3F3AP84243 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.72□□□□□ -1.97
H3F3AP84243 AC091488.1-201ENST00000604239 660 ntBASIC2.72□□□□□ -1.97
H3F3AP84243 AP004607.9-201ENST00000618202 316 ntBASIC2.72□□□□□ -1.97
H3F3AP84243 AC139713.2-210ENST00000641741 992 ntBASIC2.72□□□□□ -1.97
H3F3AP84243 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
H3F3AP84243 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
H3F3AP84243 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.71□□□□□ -1.97
H3F3AP84243 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.97
H3F3AP84243 AL355578.1-201ENST00000607405 1328 ntBASIC2.71□□□□□ -1.98
H3F3AP84243 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.71□□□□□ -1.98
H3F3AP84243 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
H3F3AP84243 GTF2H2B-203ENST00000508065 1432 ntBASIC2.71□□□□□ -1.98
H3F3AP84243 MIR22-201ENST00000362190 85 ntBASIC2.71□□□□□ -1.98
H3F3AP84243 RPL31P1-201ENST00000398116 372 ntBASIC2.71□□□□□ -1.98
H3F3AP84243 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.71□□□□□ -1.98
H3F3AP84243 AL031121.1-201ENST00000406553 254 ntBASIC2.71□□□□□ -1.98
H3F3AP84243 MTATP6P31-201ENST00000406985 692 ntBASIC2.71□□□□□ -1.98
H3F3AP84243 AC109780.2-201ENST00000413467 845 ntBASIC2.71□□□□□ -1.98
H3F3AP84243 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.71□□□□□ -1.98
H3F3AP84243 YWHAZP7-201ENST00000436906 631 ntBASIC2.71□□□□□ -1.98
H3F3AP84243 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.71□□□□□ -1.98
H3F3AP84243 Z77249.1-201ENST00000444622 1175 ntBASIC2.71□□□□□ -1.98
H3F3AP84243 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.71□□□□□ -1.98
H3F3AP84243 COX6CP2-201ENST00000444980 225 ntBASIC2.71□□□□□ -1.98
H3F3AP84243 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.71□□□□□ -1.98
H3F3AP84243 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.71□□□□□ -1.98
H3F3AP84243 RPS26P21-201ENST00000475397 348 ntBASIC2.71□□□□□ -1.98
H3F3AP84243 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.71□□□□□ -1.98
H3F3AP84243 AP000926.3-201ENST00000497201 299 ntBASIC2.71□□□□□ -1.98
H3F3AP84243 RNU6-711P-201ENST00000517255 106 ntBASIC2.71□□□□□ -1.98
H3F3AP84243 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.71□□□□□ -1.98
H3F3AP84243 AC109635.4-202ENST00000531666 412 ntBASIC2.71□□□□□ -1.98
H3F3AP84243 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.71□□□□□ -1.98
H3F3AP84243 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.71□□□□□ -1.98
H3F3AP84243 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.71□□□□□ -1.98
H3F3AP84243 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.71□□□□□ -1.98
H3F3AP84243 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.71□□□□□ -1.98
H3F3AP84243 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.71□□□□□ -1.98
H3F3AP84243 AC006539.2-201ENST00000601729 572 ntBASIC2.71□□□□□ -1.98
H3F3AP84243 AC138473.1-201ENST00000605717 526 ntBASIC2.71□□□□□ -1.98
H3F3AP84243 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.71□□□□□ -1.98
H3F3AP84243 AC135803.1-201ENST00000608748 565 ntBASIC2.71□□□□□ -1.98
H3F3AP84243 AL359535.1-201ENST00000612100 1087 ntBASIC2.71□□□□□ -1.98
H3F3AP84243 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
H3F3AP84243 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
H3F3AP84243 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.71□□□□□ -1.98
H3F3AP84243 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.71□□□□□ -1.98
H3F3AP84243 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
H3F3AP84243 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
H3F3AP84243 AC108206.1-201ENST00000570186 4159 ntBASIC2.71□□□□□ -1.98
H3F3AP84243 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
H3F3AP84243 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.7□□□□□ -1.98
H3F3AP84243 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.7□□□□□ -1.98
H3F3AP84243 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
H3F3AP84243 AC117529.2-201ENST00000512159 2068 ntBASIC2.7□□□□□ -1.98
H3F3AP84243 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
H3F3AP84243 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
H3F3AP84243 RNU4-31P-201ENST00000384211 141 ntBASIC2.7□□□□□ -1.98
H3F3AP84243 AL353692.2-201ENST00000407054 335 ntBASIC2.7□□□□□ -1.98
H3F3AP84243 RNA5SP274-201ENST00000410484 108 ntBASIC2.7□□□□□ -1.98
H3F3AP84243 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.7□□□□□ -1.98
H3F3AP84243 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.7□□□□□ -1.98
H3F3AP84243 MTCYBP24-201ENST00000420387 1106 ntBASIC2.7□□□□□ -1.98
H3F3AP84243 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
H3F3AP84243 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
H3F3AP84243 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.7□□□□□ -1.98
H3F3AP84243 HMGB1P48-201ENST00000446155 598 ntBASIC2.7□□□□□ -1.98
H3F3AP84243 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.7□□□□□ -1.98
H3F3AP84243 AC140076.1-201ENST00000449897 361 ntBASIC2.7□□□□□ -1.98
H3F3AP84243 AC107398.1-201ENST00000486904 505 ntBASIC2.7□□□□□ -1.98
H3F3AP84243 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.7□□□□□ -1.98
H3F3AP84243 AC111193.1-201ENST00000504097 155 ntBASIC2.7□□□□□ -1.98
H3F3AP84243 AC147055.1-201ENST00000509261 750 ntBASIC2.7□□□□□ -1.98
H3F3AP84243 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.7□□□□□ -1.98
H3F3AP84243 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.7□□□□□ -1.98
H3F3AP84243 AC239860.2-201ENST00000525886 270 ntBASIC2.7□□□□□ -1.98
H3F3AP84243 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.7□□□□□ -1.98
H3F3AP84243 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.7□□□□□ -1.98
H3F3AP84243 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.7□□□□□ -1.98
H3F3AP84243 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.7□□□□□ -1.98
H3F3AP84243 AC074050.1-201ENST00000563247 211 ntBASIC2.7□□□□□ -1.98
H3F3AP84243 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.7□□□□□ -1.98
H3F3AP84243 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.7□□□□□ -1.98
H3F3AP84243 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms