Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 SNORA11B-201ENST00000408175 129 ntBASIC3.44□□□□□ -1.86
CBX1P83916 TMSB4XP6-201ENST00000415187 135 ntBASIC3.44□□□□□ -1.86
CBX1P83916 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.44□□□□□ -1.86
CBX1P83916 TMSB4XP1-201ENST00000424567 135 ntBASIC3.44□□□□□ -1.86
CBX1P83916 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.44□□□□□ -1.86
CBX1P83916 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.44□□□□□ -1.86
CBX1P83916 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.44□□□□□ -1.86
CBX1P83916 SETD6P1-201ENST00000444575 317 ntBASIC3.44□□□□□ -1.86
CBX1P83916 AC044797.1-201ENST00000445744 679 ntBASIC3.44□□□□□ -1.86
CBX1P83916 AC004022.1-201ENST00000447766 1066 ntBASIC3.44□□□□□ -1.86
CBX1P83916 NDUFA5P7-201ENST00000452914 242 ntBASIC3.44□□□□□ -1.86
CBX1P83916 HMGN2P16-201ENST00000456802 261 ntBASIC3.44□□□□□ -1.86
CBX1P83916 AC048346.1-201ENST00000510247 144 ntBASIC3.44□□□□□ -1.86
CBX1P83916 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.44□□□□□ -1.86
CBX1P83916 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CBX1P83916 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.44□□□□□ -1.86
CBX1P83916 HIGD1AP5-201ENST00000529959 259 ntBASIC3.44□□□□□ -1.86
CBX1P83916 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.44□□□□□ -1.86
CBX1P83916 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.44□□□□□ -1.86
CBX1P83916 SYF2P1-201ENST00000550658 413 ntBASIC3.44□□□□□ -1.86
CBX1P83916 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.44□□□□□ -1.86
CBX1P83916 AL136520.1-202ENST00000555494 763 ntBASIC3.44□□□□□ -1.86
CBX1P83916 AC012182.1-201ENST00000570133 895 ntBASIC3.44□□□□□ -1.86
CBX1P83916 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.44□□□□□ -1.86
CBX1P83916 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.44□□□□□ -1.86
CBX1P83916 MIR3939-201ENST00000582614 106 ntBASIC3.44□□□□□ -1.86
CBX1P83916 AC023043.3-201ENST00000593113 385 ntBASIC3.44□□□□□ -1.86
CBX1P83916 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.44□□□□□ -1.86
CBX1P83916 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.44□□□□□ -1.86
CBX1P83916 AC103881.1-201ENST00000603476 538 ntBASIC3.44□□□□□ -1.86
CBX1P83916 AC011468.4-201ENST00000603942 409 ntBASIC3.44□□□□□ -1.86
CBX1P83916 MLECP1-201ENST00000615893 709 ntBASIC3.44□□□□□ -1.86
CBX1P83916 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.44□□□□□ -1.86
CBX1P83916 AC006963.1-201ENST00000624003 1052 ntBASIC3.44□□□□□ -1.86
CBX1P83916 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.44□□□□□ -1.86
CBX1P83916 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CBX1P83916 AC116096.1-201ENST00000566804 2314 ntBASIC3.44□□□□□ -1.86
CBX1P83916 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CBX1P83916 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.44□□□□□ -1.86
CBX1P83916 AC006378.2-201ENST00000623178 2476 ntBASIC3.44□□□□□ -1.86
CBX1P83916 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CBX1P83916 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.44□□□□□ -1.86
CBX1P83916 AL161431.1-201ENST00000618966 4205 ntBASIC3.43□□□□□ -1.86
CBX1P83916 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.43□□□□□ -1.86
CBX1P83916 FRG1CP-201ENST00000358464 769 ntBASIC3.43□□□□□ -1.86
CBX1P83916 RNU6-115P-201ENST00000364310 107 ntBASIC3.43□□□□□ -1.86
CBX1P83916 RPL22P22-201ENST00000395439 379 ntBASIC3.43□□□□□ -1.86
CBX1P83916 AL049693.1-201ENST00000402760 611 ntBASIC3.43□□□□□ -1.86
CBX1P83916 RPL7P10-201ENST00000417407 739 ntBASIC3.43□□□□□ -1.86
CBX1P83916 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.43□□□□□ -1.86
CBX1P83916 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.43□□□□□ -1.86
CBX1P83916 RPS27AP7-201ENST00000422792 455 ntBASIC3.43□□□□□ -1.86
CBX1P83916 RPL18P10-201ENST00000425606 538 ntBASIC3.43□□□□□ -1.86
CBX1P83916 AL512637.2-201ENST00000431287 1256 ntBASIC3.43□□□□□ -1.86
CBX1P83916 SETP8-201ENST00000435341 628 ntBASIC3.43□□□□□ -1.86
CBX1P83916 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.43□□□□□ -1.86
CBX1P83916 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.43□□□□□ -1.86
CBX1P83916 AL096829.2-201ENST00000446582 742 ntBASIC3.43□□□□□ -1.86
CBX1P83916 TPT1P12-201ENST00000448968 492 ntBASIC3.43□□□□□ -1.86
CBX1P83916 NPM1P13-201ENST00000452663 865 ntBASIC3.43□□□□□ -1.86
CBX1P83916 RPS24P6-201ENST00000452670 400 ntBASIC3.43□□□□□ -1.86
CBX1P83916 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.43□□□□□ -1.86
CBX1P83916 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.43□□□□□ -1.86
CBX1P83916 snoU13.24-201ENST00000458998 104 ntBASIC3.43□□□□□ -1.86
CBX1P83916 AC092754.2-201ENST00000463506 460 ntBASIC3.43□□□□□ -1.86
CBX1P83916 AC010285.1-201ENST00000470580 392 ntBASIC3.43□□□□□ -1.86
CBX1P83916 AL136126.1-201ENST00000473603 402 ntBASIC3.43□□□□□ -1.86
CBX1P83916 AC093267.1-201ENST00000489176 961 ntBASIC3.43□□□□□ -1.86
CBX1P83916 AC110792.1-201ENST00000491826 472 ntBASIC3.43□□□□□ -1.86
CBX1P83916 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.43□□□□□ -1.86
CBX1P83916 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.43□□□□□ -1.86
CBX1P83916 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.43□□□□□ -1.86
CBX1P83916 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.43□□□□□ -1.86
CBX1P83916 RN7SKP43-201ENST00000516173 320 ntBASIC3.43□□□□□ -1.86
CBX1P83916 RN7SKP282-201ENST00000516824 299 ntBASIC3.43□□□□□ -1.86
CBX1P83916 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.43□□□□□ -1.86
CBX1P83916 TRMT10BP1-201ENST00000519377 943 ntBASIC3.43□□□□□ -1.86
CBX1P83916 AC006518.2-201ENST00000542513 940 ntBASIC3.43□□□□□ -1.86
CBX1P83916 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.43□□□□□ -1.86
CBX1P83916 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.43□□□□□ -1.86
CBX1P83916 AC083760.1-201ENST00000589621 670 ntBASIC3.43□□□□□ -1.86
CBX1P83916 AC092474.3-201ENST00000603022 568 ntBASIC3.43□□□□□ -1.86
CBX1P83916 AC078880.5-201ENST00000617845 421 ntBASIC3.43□□□□□ -1.86
CBX1P83916 AC093875.1-201ENST00000623688 504 ntBASIC3.43□□□□□ -1.86
CBX1P83916 AC092184.1-201ENST00000625042 715 ntBASIC3.43□□□□□ -1.86
CBX1P83916 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.43□□□□□ -1.86
CBX1P83916 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.43□□□□□ -1.86
CBX1P83916 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CBX1P83916 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CBX1P83916 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CBX1P83916 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
CBX1P83916 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CBX1P83916 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CBX1P83916 AC130650.2-201ENST00000618736 2403 ntBASIC3.42□□□□□ -1.86
CBX1P83916 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CBX1P83916 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.42□□□□□ -1.86
CBX1P83916 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CBX1P83916 RNA5SP119-201ENST00000362715 117 ntBASIC3.42□□□□□ -1.86
CBX1P83916 RNU6-989P-201ENST00000362756 107 ntBASIC3.42□□□□□ -1.86
CBX1P83916 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms