Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC1.79□□□□□ -2.12
RPS28P62857 AC010409.2-201ENST00000505780 478 ntBASIC1.79□□□□□ -2.12
RPS28P62857 COL6A4P2-205ENST00000509855 506 ntBASIC1.79□□□□□ -2.12
RPS28P62857 XKRY-201ENST00000510392 1100 ntBASIC1.79□□□□□ -2.12
RPS28P62857 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC1.79□□□□□ -2.12
RPS28P62857 RN7SKP122-201ENST00000515923 296 ntBASIC1.79□□□□□ -2.12
RPS28P62857 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC1.79□□□□□ -2.12
RPS28P62857 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.79□□□□□ -2.12
RPS28P62857 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.79□□□□□ -2.12
RPS28P62857 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC1.79□□□□□ -2.12
RPS28P62857 AC023161.2-201ENST00000551218 780 ntBASIC1.79□□□□□ -2.12
RPS28P62857 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC1.79□□□□□ -2.12
RPS28P62857 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC1.79□□□□□ -2.12
RPS28P62857 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC1.79□□□□□ -2.12
RPS28P62857 AC002519.2-203ENST00000567043 837 ntBASIC1.79□□□□□ -2.12
RPS28P62857 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC1.79□□□□□ -2.12
RPS28P62857 AC015720.2-201ENST00000567709 334 ntBASIC1.79□□□□□ -2.12
RPS28P62857 MIR4685-201ENST00000578185 69 ntBASIC1.79□□□□□ -2.12
RPS28P62857 AC115989.2-201ENST00000578640 563 ntBASIC1.79□□□□□ -2.12
RPS28P62857 AC100832.2-201ENST00000582080 776 ntBASIC1.79□□□□□ -2.12
RPS28P62857 AC095055.1-201ENST00000603472 1113 ntBASIC1.79□□□□□ -2.12
RPS28P62857 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.79□□□□□ -2.12
RPS28P62857 BX664608.1-201ENST00000610519 487 ntBASIC1.79□□□□□ -2.12
RPS28P62857 AC068726.1-201ENST00000610993 341 ntBASIC1.79□□□□□ -2.12
RPS28P62857 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.79□□□□□ -2.12
RPS28P62857 AC098657.3-201ENST00000620434 263 ntBASIC1.79□□□□□ -2.12
RPS28P62857 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC1.79□□□□□ -2.12
RPS28P62857 AC089999.3-201ENST00000622440 577 ntBASIC1.79□□□□□ -2.12
RPS28P62857 MIR7515-201ENST00000637837 67 ntBASIC1.79□□□□□ -2.12
RPS28P62857 AC104446.1-201ENST00000613728 1321 ntBASIC1.79□□□□□ -2.12
RPS28P62857 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC1.79□□□□□ -2.12
RPS28P62857 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.79□□□□□ -2.12
RPS28P62857 ZNF90P1-201ENST00000480493 1951 ntBASIC1.79□□□□□ -2.12
RPS28P62857 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC1.78□□□□□ -2.12
RPS28P62857 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.78□□□□□ -2.12
RPS28P62857 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC1.78□□□□□ -2.12
RPS28P62857 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RPS28P62857 AC032011.1-201ENST00000611703 1549 ntBASIC1.78□□□□□ -2.12
RPS28P62857 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RPS28P62857 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RPS28P62857 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC1.78□□□□□ -2.12
RPS28P62857 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RPS28P62857 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.78□□□□□ -2.12
RPS28P62857 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
RPS28P62857 RNU1-150P-201ENST00000362491 162 ntBASIC1.78□□□□□ -2.12
RPS28P62857 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.78□□□□□ -2.12
RPS28P62857 RNA5SP120-201ENST00000410900 112 ntBASIC1.78□□□□□ -2.12
RPS28P62857 AL359885.1-201ENST00000415786 903 ntBASIC1.78□□□□□ -2.12
RPS28P62857 GTF3AP1-201ENST00000416942 1004 ntBASIC1.78□□□□□ -2.12
RPS28P62857 AL133325.1-201ENST00000421090 382 ntBASIC1.78□□□□□ -2.12
RPS28P62857 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.78□□□□□ -2.12
RPS28P62857 AC010881.1-201ENST00000433830 235 ntBASIC1.78□□□□□ -2.12
RPS28P62857 NDUFS5P5-201ENST00000437256 321 ntBASIC1.78□□□□□ -2.12
RPS28P62857 UBE2V1P5-201ENST00000440070 405 ntBASIC1.78□□□□□ -2.12
RPS28P62857 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.78□□□□□ -2.12
RPS28P62857 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.78□□□□□ -2.12
RPS28P62857 OSTCP8-201ENST00000445117 448 ntBASIC1.78□□□□□ -2.12
RPS28P62857 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
RPS28P62857 AL162389.1-201ENST00000449233 177 ntBASIC1.78□□□□□ -2.12
RPS28P62857 AC010655.1-201ENST00000449336 292 ntBASIC1.78□□□□□ -2.12
RPS28P62857 RPL31P11-202ENST00000454082 372 ntBASIC1.78□□□□□ -2.12
RPS28P62857 DHFRP3-201ENST00000455595 559 ntBASIC1.78□□□□□ -2.12
RPS28P62857 RNA5SP246-201ENST00000458909 119 ntBASIC1.78□□□□□ -2.12
RPS28P62857 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC1.78□□□□□ -2.12
RPS28P62857 AC005532.2-201ENST00000467154 373 ntBASIC1.78□□□□□ -2.12
RPS28P62857 AC022493.1-201ENST00000492984 337 ntBASIC1.78□□□□□ -2.12
RPS28P62857 AC147055.4-201ENST00000504399 745 ntBASIC1.78□□□□□ -2.12
RPS28P62857 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC1.78□□□□□ -2.12
RPS28P62857 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC1.78□□□□□ -2.12
RPS28P62857 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.78□□□□□ -2.12
RPS28P62857 RNU6-491P-201ENST00000516099 110 ntBASIC1.78□□□□□ -2.12
RPS28P62857 RN7SKP141-201ENST00000516167 338 ntBASIC1.78□□□□□ -2.12
RPS28P62857 SNORA31.13-201ENST00000516624 135 ntBASIC1.78□□□□□ -2.12
RPS28P62857 RNA5SP441-201ENST00000516809 88 ntBASIC1.78□□□□□ -2.12
RPS28P62857 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.78□□□□□ -2.12
RPS28P62857 IGKV1D-32-201ENST00000517449 318 ntBASIC1.78□□□□□ -2.12
RPS28P62857 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC1.78□□□□□ -2.12
RPS28P62857 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.78□□□□□ -2.12
RPS28P62857 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC1.78□□□□□ -2.12
RPS28P62857 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC1.78□□□□□ -2.12
RPS28P62857 HMGB1P6-201ENST00000569046 646 ntBASIC1.78□□□□□ -2.12
RPS28P62857 AC024267.2-201ENST00000582737 417 ntBASIC1.78□□□□□ -2.12
RPS28P62857 AC012254.4-201ENST00000588843 273 ntBASIC1.78□□□□□ -2.12
RPS28P62857 AC002984.1-201ENST00000591692 448 ntBASIC1.78□□□□□ -2.12
RPS28P62857 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC1.78□□□□□ -2.12
RPS28P62857 AC104695.2-201ENST00000605056 775 ntBASIC1.78□□□□□ -2.12
RPS28P62857 AC024940.4-201ENST00000605507 246 ntBASIC1.78□□□□□ -2.12
RPS28P62857 AC012443.1-201ENST00000605605 231 ntBASIC1.78□□□□□ -2.12
RPS28P62857 AC055876.5-201ENST00000605667 259 ntBASIC1.78□□□□□ -2.12
RPS28P62857 U3.45-201ENST00000607547 219 ntBASIC1.78□□□□□ -2.12
RPS28P62857 AC103710.4-201ENST00000609301 899 ntBASIC1.78□□□□□ -2.12
RPS28P62857 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.78□□□□□ -2.12
RPS28P62857 AC087385.3-201ENST00000620477 187 ntBASIC1.78□□□□□ -2.12
RPS28P62857 AC103564.3-201ENST00000621194 220 ntBASIC1.78□□□□□ -2.12
RPS28P62857 AL365361.1-201ENST00000566942 3481 ntBASIC1.78□□□□□ -2.12
RPS28P62857 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
RPS28P62857 AC005336.3-201ENST00000623833 2679 ntBASIC1.78□□□□□ -2.12
RPS28P62857 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
RPS28P62857 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC1.78□□□□□ -2.13
RPS28P62857 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC1.78□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms