Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC006133.1-201ENST00000617106 264 ntBASIC3.35□□□□□ -1.87
LMO4P61968 AL354798.1-201ENST00000622505 329 ntBASIC3.35□□□□□ -1.87
LMO4P61968 AL356121.2-201ENST00000624715 780 ntBASIC3.35□□□□□ -1.87
LMO4P61968 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.35□□□□□ -1.87
LMO4P61968 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.35□□□□□ -1.87
LMO4P61968 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LMO4P61968 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
LMO4P61968 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LMO4P61968 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.35□□□□□ -1.87
LMO4P61968 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LMO4P61968 AC005539.1-201ENST00000443768 1479 ntBASIC3.35□□□□□ -1.87
LMO4P61968 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LMO4P61968 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
LMO4P61968 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LMO4P61968 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LMO4P61968 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LMO4P61968 ZNF33CP-201ENST00000432492 2030 ntBASIC3.34□□□□□ -1.87
LMO4P61968 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LMO4P61968 AC107081.3-201ENST00000612715 2034 ntBASIC3.34□□□□□ -1.87
LMO4P61968 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LMO4P61968 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
LMO4P61968 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
LMO4P61968 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.34□□□□□ -1.87
LMO4P61968 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
LMO4P61968 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.34□□□□□ -1.87
LMO4P61968 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
LMO4P61968 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
LMO4P61968 RNU6-500P-201ENST00000362349 107 ntBASIC3.34□□□□□ -1.87
LMO4P61968 Y_RNA.359-201ENST00000365498 102 ntBASIC3.34□□□□□ -1.87
LMO4P61968 RNU6-1279P-201ENST00000383917 103 ntBASIC3.34□□□□□ -1.87
LMO4P61968 RNU6-1119P-201ENST00000384349 108 ntBASIC3.34□□□□□ -1.87
LMO4P61968 HSPD1P16-201ENST00000402302 394 ntBASIC3.34□□□□□ -1.87
LMO4P61968 RPL7P8-201ENST00000411964 730 ntBASIC3.34□□□□□ -1.87
LMO4P61968 AL450992.3-201ENST00000413192 568 ntBASIC3.34□□□□□ -1.87
LMO4P61968 MTND1P23-201ENST00000416931 372 ntBASIC3.34□□□□□ -1.87
LMO4P61968 RPS15AP40-201ENST00000419621 391 ntBASIC3.34□□□□□ -1.87
LMO4P61968 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.34□□□□□ -1.87
LMO4P61968 AL389915.1-201ENST00000422463 466 ntBASIC3.34□□□□□ -1.87
LMO4P61968 RPL7P44-201ENST00000424827 742 ntBASIC3.34□□□□□ -1.87
LMO4P61968 DPRXP1-201ENST00000426312 460 ntBASIC3.34□□□□□ -1.87
LMO4P61968 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.34□□□□□ -1.87
LMO4P61968 BMS1P19-201ENST00000433925 393 ntBASIC3.34□□□□□ -1.87
LMO4P61968 Z74696.2-201ENST00000436514 498 ntBASIC3.34□□□□□ -1.87
LMO4P61968 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.34□□□□□ -1.87
LMO4P61968 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.34□□□□□ -1.87
LMO4P61968 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.34□□□□□ -1.87
LMO4P61968 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.34□□□□□ -1.87
LMO4P61968 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.34□□□□□ -1.87
LMO4P61968 snoU13.7-201ENST00000459220 104 ntBASIC3.34□□□□□ -1.87
LMO4P61968 AC109486.1-201ENST00000486833 374 ntBASIC3.34□□□□□ -1.87
LMO4P61968 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.34□□□□□ -1.87
LMO4P61968 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.34□□□□□ -1.87
LMO4P61968 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.34□□□□□ -1.87
LMO4P61968 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LMO4P61968 TCP11X3P-202ENST00000514289 1254 ntBASIC3.34□□□□□ -1.87
LMO4P61968 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.34□□□□□ -1.87
LMO4P61968 RNU6-202P-201ENST00000515998 96 ntBASIC3.34□□□□□ -1.87
LMO4P61968 RNU6-416P-201ENST00000516265 103 ntBASIC3.34□□□□□ -1.87
LMO4P61968 MTND4LP26-201ENST00000518144 282 ntBASIC3.34□□□□□ -1.87
LMO4P61968 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC3.34□□□□□ -1.87
LMO4P61968 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.34□□□□□ -1.87
LMO4P61968 HIGD1AP6-201ENST00000521833 279 ntBASIC3.34□□□□□ -1.87
LMO4P61968 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.34□□□□□ -1.87
LMO4P61968 OR5G4P-201ENST00000525251 760 ntBASIC3.34□□□□□ -1.87
LMO4P61968 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.34□□□□□ -1.87
LMO4P61968 DEFB109D-201ENST00000529497 240 ntBASIC3.34□□□□□ -1.87
LMO4P61968 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.34□□□□□ -1.87
LMO4P61968 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.34□□□□□ -1.87
LMO4P61968 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.34□□□□□ -1.87
LMO4P61968 AL512347.1-201ENST00000566420 503 ntBASIC3.34□□□□□ -1.87
LMO4P61968 AP001180.3-201ENST00000582221 145 ntBASIC3.34□□□□□ -1.87
LMO4P61968 AC010680.4-201ENST00000605334 543 ntBASIC3.34□□□□□ -1.87
LMO4P61968 AC113194.1-201ENST00000606037 500 ntBASIC3.34□□□□□ -1.87
LMO4P61968 AL031775.1-201ENST00000607014 887 ntBASIC3.34□□□□□ -1.87
LMO4P61968 AC100793.4-201ENST00000613683 429 ntBASIC3.34□□□□□ -1.87
LMO4P61968 AC010678.1-201ENST00000614118 713 ntBASIC3.34□□□□□ -1.87
LMO4P61968 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.34□□□□□ -1.87
LMO4P61968 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.34□□□□□ -1.87
LMO4P61968 PCMTD1P7-201ENST00000634506 357 ntBASIC3.34□□□□□ -1.87
LMO4P61968 AC068137.3-201ENST00000639191 341 ntBASIC3.34□□□□□ -1.87
LMO4P61968 AC073869.6-201ENST00000640656 341 ntBASIC3.34□□□□□ -1.87
LMO4P61968 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC3.34□□□□□ -1.87
LMO4P61968 AC011477.1-204ENST00000623416 1325 ntBASIC3.34□□□□□ -1.87
LMO4P61968 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.34□□□□□ -1.88
LMO4P61968 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
LMO4P61968 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
LMO4P61968 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
LMO4P61968 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
LMO4P61968 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
LMO4P61968 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
LMO4P61968 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.88
LMO4P61968 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
LMO4P61968 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
LMO4P61968 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
LMO4P61968 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
LMO4P61968 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LMO4P61968 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LMO4P61968 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LMO4P61968 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.33□□□□□ -1.88
LMO4P61968 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms