Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
VSX2P58304 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
VSX2P58304 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
VSX2P58304 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
VSX2P58304 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
VSX2P58304 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
VSX2P58304 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
VSX2P58304 RNU6-805P-201ENST00000365643 106 ntBASIC3.11□□□□□ -1.91
VSX2P58304 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.11□□□□□ -1.91
VSX2P58304 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
VSX2P58304 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VSX2P58304 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.11□□□□□ -1.91
VSX2P58304 AL158050.1-201ENST00000416077 457 ntBASIC3.11□□□□□ -1.91
VSX2P58304 AC241520.1-201ENST00000422654 1099 ntBASIC3.11□□□□□ -1.91
VSX2P58304 AC091390.3-201ENST00000426478 338 ntBASIC3.11□□□□□ -1.91
VSX2P58304 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.11□□□□□ -1.91
VSX2P58304 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.11□□□□□ -1.91
VSX2P58304 MTND1P33-201ENST00000446251 917 ntBASIC3.11□□□□□ -1.91
VSX2P58304 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.11□□□□□ -1.91
VSX2P58304 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VSX2P58304 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.11□□□□□ -1.91
VSX2P58304 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.11□□□□□ -1.91
VSX2P58304 AC114967.1-201ENST00000504890 259 ntBASIC3.11□□□□□ -1.91
VSX2P58304 PTGES3P3-201ENST00000511479 482 ntBASIC3.11□□□□□ -1.91
VSX2P58304 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.11□□□□□ -1.91
VSX2P58304 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.11□□□□□ -1.91
VSX2P58304 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.11□□□□□ -1.91
VSX2P58304 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.11□□□□□ -1.91
VSX2P58304 RPL21P12-201ENST00000559810 515 ntBASIC3.11□□□□□ -1.91
VSX2P58304 EIF5A2P1-201ENST00000564027 460 ntBASIC3.11□□□□□ -1.91
VSX2P58304 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.11□□□□□ -1.91
VSX2P58304 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.11□□□□□ -1.91
VSX2P58304 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.11□□□□□ -1.91
VSX2P58304 AL160281.1-201ENST00000605307 311 ntBASIC3.11□□□□□ -1.91
VSX2P58304 AC018754.1-201ENST00000607486 925 ntBASIC3.11□□□□□ -1.91
VSX2P58304 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.11□□□□□ -1.91
VSX2P58304 AC096586.1-201ENST00000610267 561 ntBASIC3.11□□□□□ -1.91
VSX2P58304 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.11□□□□□ -1.91
VSX2P58304 FAM157B-203ENST00000639350 358 ntBASIC3.11□□□□□ -1.91
VSX2P58304 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
VSX2P58304 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VSX2P58304 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VSX2P58304 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.11□□□□□ -1.91
VSX2P58304 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VSX2P58304 AC058791.1-201ENST00000608412 3198 ntBASIC3.1□□□□□ -1.91
VSX2P58304 ZNF33CP-201ENST00000432492 2030 ntBASIC3.1□□□□□ -1.91
VSX2P58304 XPOTP1-201ENST00000443317 2398 ntBASIC3.1□□□□□ -1.91
VSX2P58304 RNA5SP295-201ENST00000362655 121 ntBASIC3.1□□□□□ -1.91
VSX2P58304 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VSX2P58304 RNU6-481P-201ENST00000384194 107 ntBASIC3.1□□□□□ -1.91
VSX2P58304 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
VSX2P58304 RNA5SP107-201ENST00000411358 122 ntBASIC3.1□□□□□ -1.91
VSX2P58304 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.1□□□□□ -1.91
VSX2P58304 TRIAP1P1-201ENST00000427062 225 ntBASIC3.1□□□□□ -1.91
VSX2P58304 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.1□□□□□ -1.91
VSX2P58304 CST9LP2-201ENST00000437612 320 ntBASIC3.1□□□□□ -1.91
VSX2P58304 MTND4P15-201ENST00000437913 1033 ntBASIC3.1□□□□□ -1.91
VSX2P58304 FABP5P3-201ENST00000437960 408 ntBASIC3.1□□□□□ -1.91
VSX2P58304 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.1□□□□□ -1.91
VSX2P58304 RPL23AP33-201ENST00000442301 452 ntBASIC3.1□□□□□ -1.91
VSX2P58304 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.1□□□□□ -1.91
VSX2P58304 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.1□□□□□ -1.91
VSX2P58304 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.1□□□□□ -1.91
VSX2P58304 AC015724.1-201ENST00000478577 156 ntBASIC3.1□□□□□ -1.91
VSX2P58304 RPS27P23-201ENST00000487608 251 ntBASIC3.1□□□□□ -1.91
VSX2P58304 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.1□□□□□ -1.91
VSX2P58304 AC008885.2-201ENST00000509506 930 ntBASIC3.1□□□□□ -1.91
VSX2P58304 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.1□□□□□ -1.91
VSX2P58304 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.1□□□□□ -1.91
VSX2P58304 RN7SKP96-201ENST00000516948 297 ntBASIC3.1□□□□□ -1.91
VSX2P58304 RN7SKP57-201ENST00000517248 293 ntBASIC3.1□□□□□ -1.91
VSX2P58304 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.1□□□□□ -1.91
VSX2P58304 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.1□□□□□ -1.91
VSX2P58304 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.1□□□□□ -1.91
VSX2P58304 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.1□□□□□ -1.91
VSX2P58304 AL021368.1-201ENST00000607490 540 ntBASIC3.1□□□□□ -1.91
VSX2P58304 AL445493.3-201ENST00000619568 477 ntBASIC3.1□□□□□ -1.91
VSX2P58304 AP001002.2-201ENST00000625137 386 ntBASIC3.1□□□□□ -1.91
VSX2P58304 AC017104.5-201ENST00000637647 639 ntBASIC3.1□□□□□ -1.91
VSX2P58304 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.1□□□□□ -1.91
VSX2P58304 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VSX2P58304 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
VSX2P58304 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
VSX2P58304 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VSX2P58304 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.1□□□□□ -1.91
VSX2P58304 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VSX2P58304 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
VSX2P58304 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.09□□□□□ -1.91
VSX2P58304 RNU6-1339P-201ENST00000363574 91 ntBASIC3.09□□□□□ -1.91
VSX2P58304 SNORD56.4-201ENST00000363883 71 ntBASIC3.09□□□□□ -1.91
VSX2P58304 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.09□□□□□ -1.91
VSX2P58304 SKINT1L-201ENST00000401057 817 ntBASIC3.09□□□□□ -1.91
VSX2P58304 RNA5SP31-201ENST00000411144 127 ntBASIC3.09□□□□□ -1.91
VSX2P58304 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.09□□□□□ -1.91
VSX2P58304 PAICSP7-201ENST00000419829 962 ntBASIC3.09□□□□□ -1.91
VSX2P58304 AL353678.1-201ENST00000422735 741 ntBASIC3.09□□□□□ -1.91
VSX2P58304 GTF2IP23-201ENST00000423746 351 ntBASIC3.09□□□□□ -1.91
VSX2P58304 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.09□□□□□ -1.91
VSX2P58304 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.09□□□□□ -1.91
VSX2P58304 OR51AB1P-201ENST00000429046 620 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms