Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 Z99497.2-201ENST00000603634 310 ntBASIC3.7□□□□□ -1.82
CDH11P55287 AC114878.2-201ENST00000604863 1251 ntBASIC3.7□□□□□ -1.82
CDH11P55287 AL451044.1-201ENST00000604867 238 ntBASIC3.7□□□□□ -1.82
CDH11P55287 HMGB1P50-201ENST00000605814 607 ntBASIC3.7□□□□□ -1.82
CDH11P55287 AC006270.3-201ENST00000605967 1036 ntBASIC3.7□□□□□ -1.82
CDH11P55287 VIS1.1-201ENST00000610517 203 ntBASIC3.7□□□□□ -1.82
CDH11P55287 AC024941.1-201ENST00000612250 334 ntBASIC3.7□□□□□ -1.82
CDH11P55287 FAM27D1-201ENST00000612308 341 ntBASIC3.7□□□□□ -1.82
CDH11P55287 AC008083.4-201ENST00000615076 444 ntBASIC3.7□□□□□ -1.82
CDH11P55287 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH11P55287 AL607023.1-201ENST00000620045 248 ntBASIC3.7□□□□□ -1.82
CDH11P55287 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.7□□□□□ -1.82
CDH11P55287 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH11P55287 MIR492-201ENST00000638676 116 ntBASIC3.7□□□□□ -1.82
CDH11P55287 ZNF37BP-203ENST00000452306 1352 ntBASIC3.7□□□□□ -1.82
CDH11P55287 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.7□□□□□ -1.82
CDH11P55287 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH11P55287 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.7□□□□□ -1.82
CDH11P55287 AC130650.2-201ENST00000618736 2403 ntBASIC3.7□□□□□ -1.82
CDH11P55287 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH11P55287 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
CDH11P55287 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH11P55287 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH11P55287 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH11P55287 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH11P55287 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDH11P55287 SPRR2C-201ENST00000290702 219 ntBASIC3.69□□□□□ -1.82
CDH11P55287 SNORA4.1-201ENST00000364263 144 ntBASIC3.69□□□□□ -1.82
CDH11P55287 RNA5SP515-201ENST00000364570 118 ntBASIC3.69□□□□□ -1.82
CDH11P55287 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDH11P55287 RNU1-13P-201ENST00000384499 162 ntBASIC3.69□□□□□ -1.82
CDH11P55287 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH11P55287 BTBD10P2-201ENST00000404779 676 ntBASIC3.69□□□□□ -1.82
CDH11P55287 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH11P55287 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH11P55287 RPL31P2-201ENST00000413849 377 ntBASIC3.69□□□□□ -1.82
CDH11P55287 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH11P55287 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDH11P55287 MTCYBP38-201ENST00000417160 1123 ntBASIC3.69□□□□□ -1.82
CDH11P55287 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH11P55287 AC090960.1-201ENST00000421072 306 ntBASIC3.69□□□□□ -1.82
CDH11P55287 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH11P55287 COX6CP15-201ENST00000426313 211 ntBASIC3.69□□□□□ -1.82
CDH11P55287 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH11P55287 AL390023.1-201ENST00000428836 262 ntBASIC3.69□□□□□ -1.82
CDH11P55287 COX6B1P7-201ENST00000430845 235 ntBASIC3.69□□□□□ -1.82
CDH11P55287 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH11P55287 AL591503.2-201ENST00000442314 1005 ntBASIC3.69□□□□□ -1.82
CDH11P55287 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH11P55287 HSFY6P-201ENST00000445573 403 ntBASIC3.69□□□□□ -1.82
CDH11P55287 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH11P55287 MTND2P19-201ENST00000449129 1012 ntBASIC3.69□□□□□ -1.82
CDH11P55287 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH11P55287 RPL7P31-201ENST00000450192 724 ntBASIC3.69□□□□□ -1.82
CDH11P55287 AC097262.1-201ENST00000452559 548 ntBASIC3.69□□□□□ -1.82
CDH11P55287 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH11P55287 AC010301.1-201ENST00000473936 355 ntBASIC3.69□□□□□ -1.82
CDH11P55287 AP000926.1-201ENST00000479573 241 ntBASIC3.69□□□□□ -1.82
CDH11P55287 AC108078.3-201ENST00000502633 489 ntBASIC3.69□□□□□ -1.82
CDH11P55287 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH11P55287 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH11P55287 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
CDH11P55287 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH11P55287 AC111000.2-201ENST00000507775 550 ntBASIC3.69□□□□□ -1.82
CDH11P55287 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH11P55287 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH11P55287 AC118465.1-201ENST00000513820 1271 ntBASIC3.69□□□□□ -1.82
CDH11P55287 RNU7-143P-201ENST00000516781 65 ntBASIC3.69□□□□□ -1.82
CDH11P55287 RNU6-232P-201ENST00000517144 64 ntBASIC3.69□□□□□ -1.82
CDH11P55287 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH11P55287 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH11P55287 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH11P55287 MTCO1P47-201ENST00000523889 1271 ntBASIC3.69□□□□□ -1.82
CDH11P55287 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH11P55287 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH11P55287 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.69□□□□□ -1.82
CDH11P55287 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH11P55287 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH11P55287 OR7K1P-201ENST00000546439 926 ntBASIC3.69□□□□□ -1.82
CDH11P55287 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH11P55287 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH11P55287 AL161713.1-201ENST00000555538 145 ntBASIC3.69□□□□□ -1.82
CDH11P55287 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH11P55287 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH11P55287 AC020914.6-201ENST00000594327 272 ntBASIC3.69□□□□□ -1.82
CDH11P55287 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH11P55287 VN1R92P-201ENST00000598511 928 ntBASIC3.69□□□□□ -1.82
CDH11P55287 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH11P55287 AL161729.3-201ENST00000603533 673 ntBASIC3.69□□□□□ -1.82
CDH11P55287 AC004223.4-201ENST00000612426 332 ntBASIC3.69□□□□□ -1.82
CDH11P55287 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH11P55287 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CDH11P55287 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDH11P55287 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
CDH11P55287 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDH11P55287 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDH11P55287 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH11P55287 IPO8P1-201ENST00000455509 3109 ntBASIC3.68□□□□□ -1.82
CDH11P55287 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH11P55287 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms