Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC090312.2-201ENST00000582687 378 ntBASIC3.8□□□□□ -1.8
VCPP55072 AC006504.3-201ENST00000586818 523 ntBASIC3.8□□□□□ -1.8
VCPP55072 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.8□□□□□ -1.8
VCPP55072 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.8□□□□□ -1.8
VCPP55072 AL451007.1-201ENST00000595491 289 ntBASIC3.8□□□□□ -1.8
VCPP55072 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.8□□□□□ -1.8
VCPP55072 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VCPP55072 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.8□□□□□ -1.8
VCPP55072 AC006077.1-201ENST00000604746 343 ntBASIC3.8□□□□□ -1.8
VCPP55072 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VCPP55072 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.8□□□□□ -1.8
VCPP55072 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
VCPP55072 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VCPP55072 AL732372.2-225ENST00000642124 456 ntBASIC3.8□□□□□ -1.8
VCPP55072 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.8□□□□□ -1.8
VCPP55072 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VCPP55072 ZNF849P-201ENST00000594711 1566 ntBASIC3.8□□□□□ -1.8
VCPP55072 AC138915.3-201ENST00000562908 1389 ntBASIC3.79□□□□□ -1.8
VCPP55072 RNA5SP42-201ENST00000364278 115 ntBASIC3.79□□□□□ -1.8
VCPP55072 SNORD65C-201ENST00000390962 71 ntBASIC3.79□□□□□ -1.8
VCPP55072 MTHFD2P2-201ENST00000407725 247 ntBASIC3.79□□□□□ -1.8
VCPP55072 HSFY4P-201ENST00000415994 1181 ntBASIC3.79□□□□□ -1.8
VCPP55072 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.79□□□□□ -1.8
VCPP55072 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.79□□□□□ -1.8
VCPP55072 AC013262.1-201ENST00000426710 252 ntBASIC3.79□□□□□ -1.8
VCPP55072 AC006989.1-201ENST00000427212 131 ntBASIC3.79□□□□□ -1.8
VCPP55072 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.79□□□□□ -1.8
VCPP55072 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.79□□□□□ -1.8
VCPP55072 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.79□□□□□ -1.8
VCPP55072 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.79□□□□□ -1.8
VCPP55072 FABP5P3-201ENST00000437960 408 ntBASIC3.79□□□□□ -1.8
VCPP55072 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.79□□□□□ -1.8
VCPP55072 DNAJC19P8-201ENST00000452887 259 ntBASIC3.79□□□□□ -1.8
VCPP55072 MTND2P39-201ENST00000457230 764 ntBASIC3.79□□□□□ -1.8
VCPP55072 RPS4XP6-201ENST00000477670 797 ntBASIC3.79□□□□□ -1.8
VCPP55072 AC016065.2-201ENST00000514530 444 ntBASIC3.79□□□□□ -1.8
VCPP55072 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.79□□□□□ -1.8
VCPP55072 AP003102.1-201ENST00000525638 661 ntBASIC3.79□□□□□ -1.8
VCPP55072 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.79□□□□□ -1.8
VCPP55072 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.79□□□□□ -1.8
VCPP55072 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.79□□□□□ -1.8
VCPP55072 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.79□□□□□ -1.8
VCPP55072 MIR4789-201ENST00000577469 82 ntBASIC3.79□□□□□ -1.8
VCPP55072 BNIP3P31-201ENST00000604515 566 ntBASIC3.79□□□□□ -1.8
VCPP55072 AL133445.2-201ENST00000611191 527 ntBASIC3.79□□□□□ -1.8
VCPP55072 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.79□□□□□ -1.8
VCPP55072 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.79□□□□□ -1.8
VCPP55072 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.79□□□□□ -1.8
VCPP55072 AC017104.5-201ENST00000637647 639 ntBASIC3.79□□□□□ -1.8
VCPP55072 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.79□□□□□ -1.8
VCPP55072 AP000553.6-201ENST00000641242 118 ntBASIC3.79□□□□□ -1.8
VCPP55072 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
VCPP55072 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VCPP55072 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.79□□□□□ -1.8
VCPP55072 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.79□□□□□ -1.8
VCPP55072 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VCPP55072 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.78□□□□□ -1.8
VCPP55072 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
VCPP55072 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
VCPP55072 SNORA80A-201ENST00000363922 136 ntBASIC3.78□□□□□ -1.8
VCPP55072 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.78□□□□□ -1.8
VCPP55072 AL355615.1-201ENST00000406187 641 ntBASIC3.78□□□□□ -1.8
VCPP55072 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.78□□□□□ -1.8
VCPP55072 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.78□□□□□ -1.8
VCPP55072 AC244098.2-201ENST00000422068 99 ntBASIC3.78□□□□□ -1.8
VCPP55072 RPF2P1-201ENST00000424137 906 ntBASIC3.78□□□□□ -1.8
VCPP55072 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.78□□□□□ -1.8
VCPP55072 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VCPP55072 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.78□□□□□ -1.8
VCPP55072 AC233982.1-201ENST00000451247 436 ntBASIC3.78□□□□□ -1.8
VCPP55072 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.78□□□□□ -1.8
VCPP55072 MTND3P3-201ENST00000505004 126 ntBASIC3.78□□□□□ -1.8
VCPP55072 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.78□□□□□ -1.8
VCPP55072 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.78□□□□□ -1.8
VCPP55072 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.78□□□□□ -1.8
VCPP55072 SERPINE4P-201ENST00000554978 281 ntBASIC3.78□□□□□ -1.8
VCPP55072 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.78□□□□□ -1.8
VCPP55072 AC090616.5-202ENST00000582111 297 ntBASIC3.78□□□□□ -1.8
VCPP55072 AC006116.7-201ENST00000590141 756 ntBASIC3.78□□□□□ -1.8
VCPP55072 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.78□□□□□ -1.8
VCPP55072 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.78□□□□□ -1.8
VCPP55072 AC133794.1-201ENST00000602731 914 ntBASIC3.78□□□□□ -1.8
VCPP55072 AL138955.1-201ENST00000622881 1040 ntBASIC3.78□□□□□ -1.8
VCPP55072 AC090337.1-201ENST00000579651 2074 ntBASIC3.78□□□□□ -1.8
VCPP55072 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VCPP55072 AC091152.2-201ENST00000591628 2569 ntBASIC3.78□□□□□ -1.8
VCPP55072 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VCPP55072 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VCPP55072 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
VCPP55072 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VCPP55072 AC016716.1-201ENST00000265882 708 ntBASIC3.77□□□□□ -1.81
VCPP55072 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VCPP55072 RPL23AP57-201ENST00000332361 466 ntBASIC3.77□□□□□ -1.81
VCPP55072 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VCPP55072 RNU6-600P-201ENST00000362524 99 ntBASIC3.77□□□□□ -1.81
VCPP55072 MIR607-201ENST00000385241 96 ntBASIC3.77□□□□□ -1.81
VCPP55072 U3.19-201ENST00000390893 196 ntBASIC3.77□□□□□ -1.81
VCPP55072 MTND4LP20-201ENST00000402379 270 ntBASIC3.77□□□□□ -1.81
VCPP55072 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.77□□□□□ -1.81
VCPP55072 EI24P1-201ENST00000416584 867 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms