Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC090312.1-201ENST00000580637 348 ntBASIC4.53□□□□□ -1.68
COPB1P53618 MIR4715-201ENST00000584117 79 ntBASIC4.53□□□□□ -1.68
COPB1P53618 AC104662.1-201ENST00000604448 511 ntBASIC4.53□□□□□ -1.68
COPB1P53618 AC068276.1-201ENST00000605793 379 ntBASIC4.53□□□□□ -1.68
COPB1P53618 AP001521.1-201ENST00000609150 300 ntBASIC4.53□□□□□ -1.68
COPB1P53618 AC087241.4-201ENST00000612441 480 ntBASIC4.53□□□□□ -1.68
COPB1P53618 AL356121.2-201ENST00000624715 780 ntBASIC4.53□□□□□ -1.68
COPB1P53618 AC079228.1-201ENST00000624774 1049 ntBASIC4.53□□□□□ -1.68
COPB1P53618 AC025048.6-202ENST00000627667 438 ntBASIC4.53□□□□□ -1.68
COPB1P53618 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.53□□□□□ -1.68
COPB1P53618 LINC00561-201ENST00000565815 2738 ntBASIC4.53□□□□□ -1.68
COPB1P53618 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COPB1P53618 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COPB1P53618 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COPB1P53618 AC010329.2-201ENST00000595195 2737 ntBASIC4.52□□□□□ -1.69
COPB1P53618 CR383658.2-201ENST00000547576 1525 ntBASIC4.52□□□□□ -1.69
COPB1P53618 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
COPB1P53618 Z82217.1-201ENST00000625157 8149 ntBASIC4.52□□□□□ -1.69
COPB1P53618 AC090971.4-201ENST00000560291 1800 ntBASIC4.52□□□□□ -1.69
COPB1P53618 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COPB1P53618 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.52□□□□□ -1.69
COPB1P53618 RNY3P10-201ENST00000384764 102 ntBASIC4.52□□□□□ -1.69
COPB1P53618 AC007899.1-201ENST00000412776 775 ntBASIC4.52□□□□□ -1.69
COPB1P53618 UBE2V1P10-201ENST00000414685 269 ntBASIC4.52□□□□□ -1.69
COPB1P53618 AC009302.1-201ENST00000417147 390 ntBASIC4.52□□□□□ -1.69
COPB1P53618 RPS27AP7-201ENST00000422792 455 ntBASIC4.52□□□□□ -1.69
COPB1P53618 AL953862.1-201ENST00000423016 168 ntBASIC4.52□□□□□ -1.69
COPB1P53618 IPMKP1-201ENST00000425988 855 ntBASIC4.52□□□□□ -1.69
COPB1P53618 AL512649.1-201ENST00000428997 581 ntBASIC4.52□□□□□ -1.69
COPB1P53618 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.52□□□□□ -1.69
COPB1P53618 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.52□□□□□ -1.69
COPB1P53618 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.52□□□□□ -1.69
COPB1P53618 FHP1-201ENST00000442741 703 ntBASIC4.52□□□□□ -1.69
COPB1P53618 CDC27P1-201ENST00000445384 715 ntBASIC4.52□□□□□ -1.69
COPB1P53618 BMI1P1-201ENST00000445879 941 ntBASIC4.52□□□□□ -1.69
COPB1P53618 RPL23AP15-201ENST00000450202 459 ntBASIC4.52□□□□□ -1.69
COPB1P53618 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.52□□□□□ -1.69
COPB1P53618 CFTRP1-201ENST00000456646 183 ntBASIC4.52□□□□□ -1.69
COPB1P53618 RPL36AP13-201ENST00000457490 317 ntBASIC4.52□□□□□ -1.69
COPB1P53618 TPT1P7-201ENST00000458300 517 ntBASIC4.52□□□□□ -1.69
COPB1P53618 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.52□□□□□ -1.69
COPB1P53618 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COPB1P53618 RNU6-488P-201ENST00000515918 99 ntBASIC4.52□□□□□ -1.69
COPB1P53618 RNU7-143P-201ENST00000516781 65 ntBASIC4.52□□□□□ -1.69
COPB1P53618 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.52□□□□□ -1.69
COPB1P53618 DEFB131D-201ENST00000526803 184 ntBASIC4.52□□□□□ -1.69
COPB1P53618 AC105233.3-201ENST00000531125 744 ntBASIC4.52□□□□□ -1.69
COPB1P53618 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.52□□□□□ -1.69
COPB1P53618 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.52□□□□□ -1.69
COPB1P53618 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.52□□□□□ -1.69
COPB1P53618 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.52□□□□□ -1.69
COPB1P53618 RPL23AP87-202ENST00000573039 466 ntBASIC4.52□□□□□ -1.69
COPB1P53618 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.52□□□□□ -1.69
COPB1P53618 AC022655.2-201ENST00000577280 318 ntBASIC4.52□□□□□ -1.69
COPB1P53618 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.52□□□□□ -1.69
COPB1P53618 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.52□□□□□ -1.69
COPB1P53618 AC010200.2-201ENST00000605098 235 ntBASIC4.52□□□□□ -1.69
COPB1P53618 AL356218.2-201ENST00000605264 187 ntBASIC4.52□□□□□ -1.69
COPB1P53618 AL355816.1-201ENST00000607951 118 ntBASIC4.52□□□□□ -1.69
COPB1P53618 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.52□□□□□ -1.69
COPB1P53618 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.52□□□□□ -1.69
COPB1P53618 IQCB2P-201ENST00000401788 1633 ntBASIC4.52□□□□□ -1.69
COPB1P53618 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.52□□□□□ -1.69
COPB1P53618 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
COPB1P53618 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
COPB1P53618 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COPB1P53618 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COPB1P53618 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
COPB1P53618 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COPB1P53618 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COPB1P53618 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COPB1P53618 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.52□□□□□ -1.69
COPB1P53618 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
COPB1P53618 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.51□□□□□ -1.69
COPB1P53618 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.51□□□□□ -1.69
COPB1P53618 PABPC1P9-201ENST00000426076 1612 ntBASIC4.51□□□□□ -1.69
COPB1P53618 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
COPB1P53618 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COPB1P53618 SNRPEP3-201ENST00000338402 276 ntBASIC4.51□□□□□ -1.69
COPB1P53618 RNU6-984P-201ENST00000363236 109 ntBASIC4.51□□□□□ -1.69
COPB1P53618 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COPB1P53618 PRRC2CP1-201ENST00000404428 159 ntBASIC4.51□□□□□ -1.69
COPB1P53618 SNORA11-201ENST00000408789 128 ntBASIC4.51□□□□□ -1.69
COPB1P53618 RPS7P13-201ENST00000413955 498 ntBASIC4.51□□□□□ -1.69
COPB1P53618 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.51□□□□□ -1.69
COPB1P53618 ELOCP17-201ENST00000414751 326 ntBASIC4.51□□□□□ -1.69
COPB1P53618 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.51□□□□□ -1.69
COPB1P53618 AC093698.1-201ENST00000423843 571 ntBASIC4.51□□□□□ -1.69
COPB1P53618 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.51□□□□□ -1.69
COPB1P53618 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.51□□□□□ -1.69
COPB1P53618 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.51□□□□□ -1.69
COPB1P53618 RPS29P17-201ENST00000430795 166 ntBASIC4.51□□□□□ -1.69
COPB1P53618 MTND1P28-201ENST00000435623 950 ntBASIC4.51□□□□□ -1.69
COPB1P53618 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.51□□□□□ -1.69
COPB1P53618 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.51□□□□□ -1.69
COPB1P53618 AC243772.1-201ENST00000451620 410 ntBASIC4.51□□□□□ -1.69
COPB1P53618 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.51□□□□□ -1.69
COPB1P53618 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.51□□□□□ -1.69
COPB1P53618 AC010460.1-201ENST00000507087 466 ntBASIC4.51□□□□□ -1.69
COPB1P53618 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms