Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RAB28P1-201ENST00000411517 641 ntBASIC4.6□□□□□ -1.67
NEK3P51956 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.6□□□□□ -1.67
NEK3P51956 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.6□□□□□ -1.67
NEK3P51956 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.6□□□□□ -1.67
NEK3P51956 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.6□□□□□ -1.67
NEK3P51956 RAD23BP1-201ENST00000421404 1227 ntBASIC4.6□□□□□ -1.67
NEK3P51956 C4BPAP2-201ENST00000428434 478 ntBASIC4.6□□□□□ -1.67
NEK3P51956 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.6□□□□□ -1.67
NEK3P51956 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.6□□□□□ -1.67
NEK3P51956 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.6□□□□□ -1.67
NEK3P51956 AL121871.1-201ENST00000443413 436 ntBASIC4.6□□□□□ -1.67
NEK3P51956 NPM1P49-201ENST00000448027 714 ntBASIC4.6□□□□□ -1.67
NEK3P51956 ISCUP1-201ENST00000454451 448 ntBASIC4.6□□□□□ -1.67
NEK3P51956 UBTFL6-201ENST00000477929 1024 ntBASIC4.6□□□□□ -1.67
NEK3P51956 RPS6P4-201ENST00000494693 758 ntBASIC4.6□□□□□ -1.67
NEK3P51956 AC113430.1-201ENST00000506872 718 ntBASIC4.6□□□□□ -1.67
NEK3P51956 OR5BM1P-201ENST00000512021 366 ntBASIC4.6□□□□□ -1.67
NEK3P51956 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.6□□□□□ -1.67
NEK3P51956 MED28P5-201ENST00000528254 438 ntBASIC4.6□□□□□ -1.67
NEK3P51956 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NEK3P51956 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.6□□□□□ -1.67
NEK3P51956 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NEK3P51956 MIR4277-201ENST00000578298 84 ntBASIC4.6□□□□□ -1.67
NEK3P51956 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NEK3P51956 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.6□□□□□ -1.67
NEK3P51956 BNIP3P23-201ENST00000599655 511 ntBASIC4.6□□□□□ -1.67
NEK3P51956 AC006254.3-201ENST00000603353 884 ntBASIC4.6□□□□□ -1.67
NEK3P51956 AC011451.2-201ENST00000604303 598 ntBASIC4.6□□□□□ -1.67
NEK3P51956 AC010201.1-201ENST00000605051 540 ntBASIC4.6□□□□□ -1.67
NEK3P51956 AL356218.2-201ENST00000605264 187 ntBASIC4.6□□□□□ -1.67
NEK3P51956 AC002550.2-201ENST00000621246 394 ntBASIC4.6□□□□□ -1.67
NEK3P51956 MIR6810-201ENST00000622701 70 ntBASIC4.6□□□□□ -1.67
NEK3P51956 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NEK3P51956 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NEK3P51956 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.6□□□□□ -1.67
NEK3P51956 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.6□□□□□ -1.67
NEK3P51956 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.6□□□□□ -1.67
NEK3P51956 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NEK3P51956 CR383658.2-201ENST00000547576 1525 ntBASIC4.6□□□□□ -1.67
NEK3P51956 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
NEK3P51956 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NEK3P51956 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
NEK3P51956 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NEK3P51956 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
NEK3P51956 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
NEK3P51956 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NEK3P51956 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.59□□□□□ -1.67
NEK3P51956 SNORA51.2-201ENST00000364595 132 ntBASIC4.59□□□□□ -1.67
NEK3P51956 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
NEK3P51956 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
NEK3P51956 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NEK3P51956 AC007066.1-201ENST00000392902 381 ntBASIC4.59□□□□□ -1.67
NEK3P51956 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
NEK3P51956 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.59□□□□□ -1.67
NEK3P51956 BEND7P1-201ENST00000422058 457 ntBASIC4.59□□□□□ -1.67
NEK3P51956 RPS27AP14-201ENST00000422868 454 ntBASIC4.59□□□□□ -1.67
NEK3P51956 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.59□□□□□ -1.67
NEK3P51956 RPL23AP93-201ENST00000440847 484 ntBASIC4.59□□□□□ -1.67
NEK3P51956 MTND1P30-201ENST00000441241 901 ntBASIC4.59□□□□□ -1.67
NEK3P51956 AP000542.1-201ENST00000448473 371 ntBASIC4.59□□□□□ -1.67
NEK3P51956 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.59□□□□□ -1.67
NEK3P51956 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.59□□□□□ -1.67
NEK3P51956 SNORD121B-201ENST00000458838 81 ntBASIC4.59□□□□□ -1.67
NEK3P51956 SETP11-201ENST00000473027 690 ntBASIC4.59□□□□□ -1.67
NEK3P51956 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.59□□□□□ -1.67
NEK3P51956 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NEK3P51956 AC006499.5-201ENST00000505037 514 ntBASIC4.59□□□□□ -1.67
NEK3P51956 HMGB1P22-201ENST00000505315 124 ntBASIC4.59□□□□□ -1.67
NEK3P51956 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NEK3P51956 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.59□□□□□ -1.67
NEK3P51956 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.59□□□□□ -1.67
NEK3P51956 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NEK3P51956 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.59□□□□□ -1.67
NEK3P51956 AC091515.1-201ENST00000548110 679 ntBASIC4.59□□□□□ -1.67
NEK3P51956 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.59□□□□□ -1.67
NEK3P51956 AC012435.1-202ENST00000568772 240 ntBASIC4.59□□□□□ -1.67
NEK3P51956 AL121834.1-201ENST00000572284 509 ntBASIC4.59□□□□□ -1.67
NEK3P51956 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.59□□□□□ -1.67
NEK3P51956 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.59□□□□□ -1.67
NEK3P51956 AP001350.1-201ENST00000601906 1524 ntBASIC4.59□□□□□ -1.67
NEK3P51956 WISP1-OT1-201ENST00000602893 642 ntBASIC4.59□□□□□ -1.67
NEK3P51956 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.59□□□□□ -1.67
NEK3P51956 AC092354.1-201ENST00000606057 376 ntBASIC4.59□□□□□ -1.67
NEK3P51956 AC107214.2-201ENST00000608204 634 ntBASIC4.59□□□□□ -1.67
NEK3P51956 AC012409.3-201ENST00000611343 981 ntBASIC4.59□□□□□ -1.67
NEK3P51956 AC006378.2-201ENST00000623178 2476 ntBASIC4.59□□□□□ -1.67
NEK3P51956 AC026422.1-201ENST00000623961 452 ntBASIC4.59□□□□□ -1.67
NEK3P51956 AC112200.1-201ENST00000625015 234 ntBASIC4.59□□□□□ -1.67
NEK3P51956 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NEK3P51956 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
NEK3P51956 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.59□□□□□ -1.68
NEK3P51956 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.59□□□□□ -1.68
NEK3P51956 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.59□□□□□ -1.68
NEK3P51956 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.58□□□□□ -1.68
NEK3P51956 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NEK3P51956 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.58□□□□□ -1.68
NEK3P51956 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.58□□□□□ -1.68
NEK3P51956 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
NEK3P51956 RNU6-1155P-201ENST00000363554 107 ntBASIC4.58□□□□□ -1.68
NEK3P51956 RNA5SP22-201ENST00000365393 109 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms