Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC7.45□□□□□ -1.22
PRIM1P49642 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
PRIM1P49642 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PRIM1P49642 RNU1-59P-201ENST00000364829 162 ntBASIC7.45□□□□□ -1.22
PRIM1P49642 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
PRIM1P49642 Y_RNA.424-201ENST00000384063 103 ntBASIC7.45□□□□□ -1.22
PRIM1P49642 AL121835.1-201ENST00000404250 354 ntBASIC7.45□□□□□ -1.22
PRIM1P49642 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC7.45□□□□□ -1.22
PRIM1P49642 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC7.45□□□□□ -1.22
PRIM1P49642 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC7.45□□□□□ -1.22
PRIM1P49642 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC7.45□□□□□ -1.22
PRIM1P49642 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC7.45□□□□□ -1.22
PRIM1P49642 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC7.45□□□□□ -1.22
PRIM1P49642 AL590233.1-201ENST00000430017 456 ntBASIC7.45□□□□□ -1.22
PRIM1P49642 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC7.45□□□□□ -1.22
PRIM1P49642 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC7.45□□□□□ -1.22
PRIM1P49642 RBMY2TP-201ENST00000451162 947 ntBASIC7.45□□□□□ -1.22
PRIM1P49642 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC7.45□□□□□ -1.22
PRIM1P49642 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC7.45□□□□□ -1.22
PRIM1P49642 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC7.45□□□□□ -1.22
PRIM1P49642 AC006967.1-201ENST00000467608 589 ntBASIC7.45□□□□□ -1.22
PRIM1P49642 ATP5LP5-201ENST00000483050 299 ntBASIC7.45□□□□□ -1.22
PRIM1P49642 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC7.45□□□□□ -1.22
PRIM1P49642 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC7.45□□□□□ -1.22
PRIM1P49642 RNU6-699P-201ENST00000517081 110 ntBASIC7.45□□□□□ -1.22
PRIM1P49642 MIR3691-201ENST00000578066 90 ntBASIC7.45□□□□□ -1.22
PRIM1P49642 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC7.45□□□□□ -1.22
PRIM1P49642 U1.25-201ENST00000614085 162 ntBASIC7.45□□□□□ -1.22
PRIM1P49642 AL355365.1-201ENST00000616480 294 ntBASIC7.45□□□□□ -1.22
PRIM1P49642 MPP6-209ENST00000625307 126 ntTSL 5 BASIC7.45□□□□□ -1.22
PRIM1P49642 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PRIM1P49642 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PRIM1P49642 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
PRIM1P49642 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC7.45□□□□□ -1.22
PRIM1P49642 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
PRIM1P49642 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
PRIM1P49642 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
PRIM1P49642 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
PRIM1P49642 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
PRIM1P49642 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
PRIM1P49642 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
PRIM1P49642 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7.44□□□□□ -1.22
PRIM1P49642 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
PRIM1P49642 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.44□□□□□ -1.22
PRIM1P49642 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
PRIM1P49642 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC7.44□□□□□ -1.22
PRIM1P49642 RHOT1P2-201ENST00000366423 333 ntBASIC7.44□□□□□ -1.22
PRIM1P49642 MIR450B-201ENST00000401182 78 ntBASIC7.44□□□□□ -1.22
PRIM1P49642 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC7.44□□□□□ -1.22
PRIM1P49642 CALM2P2-201ENST00000428512 440 ntBASIC7.44□□□□□ -1.22
PRIM1P49642 AL161722.2-201ENST00000434731 981 ntBASIC7.44□□□□□ -1.22
PRIM1P49642 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC7.44□□□□□ -1.22
PRIM1P49642 AC079922.1-201ENST00000443291 359 ntBASIC7.44□□□□□ -1.22
PRIM1P49642 RN7SL809P-201ENST00000482040 297 ntBASIC7.44□□□□□ -1.22
PRIM1P49642 DEFB109F-201ENST00000491870 277 ntBASIC7.44□□□□□ -1.22
PRIM1P49642 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC7.44□□□□□ -1.22
PRIM1P49642 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC7.44□□□□□ -1.22
PRIM1P49642 RRN3P3-201ENST00000549207 578 ntBASIC7.44□□□□□ -1.22
PRIM1P49642 AC126177.5-201ENST00000549599 178 ntBASIC7.44□□□□□ -1.22
PRIM1P49642 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC7.44□□□□□ -1.22
PRIM1P49642 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC7.44□□□□□ -1.22
PRIM1P49642 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC7.44□□□□□ -1.22
PRIM1P49642 AC005899.2-201ENST00000584353 90 ntBASIC7.44□□□□□ -1.22
PRIM1P49642 MIR6128-201ENST00000615528 109 ntBASIC7.44□□□□□ -1.22
PRIM1P49642 AL138825.1-201ENST00000618587 192 ntBASIC7.44□□□□□ -1.22
PRIM1P49642 AC015967.1-201ENST00000619893 476 ntBASIC7.44□□□□□ -1.22
PRIM1P49642 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC7.44□□□□□ -1.22
PRIM1P49642 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PRIM1P49642 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.44□□□□□ -1.22
PRIM1P49642 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.44□□□□□ -1.22
PRIM1P49642 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.44□□□□□ -1.22
PRIM1P49642 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
PRIM1P49642 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
PRIM1P49642 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PRIM1P49642 THAP12P9-201ENST00000503971 2360 ntBASIC7.44□□□□□ -1.22
PRIM1P49642 AC087516.1-201ENST00000561236 2428 ntBASIC7.43□□□□□ -1.22
PRIM1P49642 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
PRIM1P49642 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
PRIM1P49642 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
PRIM1P49642 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
PRIM1P49642 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PRIM1P49642 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PRIM1P49642 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PRIM1P49642 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PRIM1P49642 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.43□□□□□ -1.22
PRIM1P49642 Y_RNA.39-201ENST00000362620 98 ntBASIC7.43□□□□□ -1.22
PRIM1P49642 RNU6-1287P-201ENST00000362914 107 ntBASIC7.43□□□□□ -1.22
PRIM1P49642 RNU6-511P-201ENST00000363496 107 ntBASIC7.43□□□□□ -1.22
PRIM1P49642 RNU4-2-201ENST00000365668 141 ntBASIC7.43□□□□□ -1.22
PRIM1P49642 Y_RNA.496-201ENST00000384444 101 ntBASIC7.43□□□□□ -1.22
PRIM1P49642 RNU6-1060P-201ENST00000384664 107 ntBASIC7.43□□□□□ -1.22
PRIM1P49642 RNU6-1050P-201ENST00000410388 107 ntBASIC7.43□□□□□ -1.22
PRIM1P49642 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC7.43□□□□□ -1.22
PRIM1P49642 E2F6P2-201ENST00000420708 748 ntBASIC7.43□□□□□ -1.22
PRIM1P49642 EIF4EP1-201ENST00000422311 642 ntBASIC7.43□□□□□ -1.22
PRIM1P49642 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.43□□□□□ -1.22
PRIM1P49642 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC7.43□□□□□ -1.22
PRIM1P49642 AC099799.1-201ENST00000439809 192 ntBASIC7.43□□□□□ -1.22
PRIM1P49642 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC7.43□□□□□ -1.22
PRIM1P49642 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms