Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXA1P49639 AC016831.4-201ENST00000438302 307 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXA1P49639 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXA1P49639 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXA1P49639 RPS26P56-201ENST00000444468 240 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 AL162151.2-201ENST00000448875 158 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 AC005297.2-201ENST00000450430 606 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXA1P49639 NDUFA12P1-201ENST00000455914 406 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXA1P49639 AC026410.2-201ENST00000460281 156 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 RPL37P6-202ENST00000464216 403 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 PLGLA-201ENST00000465668 449 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 AC005532.2-201ENST00000467154 373 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 RN7SL177P-201ENST00000476596 299 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 AC017015.1-201ENST00000477387 286 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 AC116337.2-201ENST00000477662 156 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 AC069499.1-201ENST00000489433 509 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXA1P49639 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXA1P49639 KLRA1P-201ENST00000503499 986 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 SCARNA22-201ENST00000503991 125 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 CBX3P3-201ENST00000508108 532 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXA1P49639 AC079140.3-201ENST00000511111 550 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 AC021146.1-201ENST00000511202 716 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 AC010625.1-201ENST00000511296 403 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 AF131216.2-201ENST00000512316 564 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXA1P49639 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA1P49639 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
HOXA1P49639 OR5AN2P-201ENST00000534535 896 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXA1P49639 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXA1P49639 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXA1P49639 MTND1P15-201ENST00000579262 949 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 AP001004.1-201ENST00000582468 324 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXA1P49639 OR7E18P-201ENST00000592589 702 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.63□□□□□ -1.83
HOXA1P49639 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA1P49639 AC068790.2-201ENST00000602601 557 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 AC087763.1-201ENST00000603391 286 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 MIR432-201ENST00000606207 94 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 RNU6-88P-201ENST00000606801 100 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 AC097468.3-201ENST00000607956 456 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 AC025594.3-201ENST00000613068 790 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA1P49639 AC009509.4-201ENST00000619202 509 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXA1P49639 AC025048.6-202ENST00000627667 438 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA1P49639 MFSD8-242ENST00000641690 4199 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA1P49639 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXA1P49639 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA1P49639 MTND5P28-201ENST00000438005 1594 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA1P49639 AL118496.1-201ENST00000440201 1812 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 ELL2P4-201ENST00000446870 1376 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 INTS6P1-201ENST00000504674 2530 ntBASIC3.63□□□□□ -1.83
HOXA1P49639 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HOXA1P49639 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
HOXA1P49639 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXA1P49639 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA1P49639 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA1P49639 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA1P49639 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA1P49639 ZNF137P-201ENST00000456718 1920 ntBASIC3.62□□□□□ -1.83
HOXA1P49639 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXA1P49639 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA1P49639 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA1P49639 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA1P49639 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA1P49639 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA1P49639 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA1P49639 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA1P49639 RNU6-462P-201ENST00000362659 105 ntBASIC3.62□□□□□ -1.83
HOXA1P49639 Y_RNA.97-201ENST00000363094 102 ntBASIC3.62□□□□□ -1.83
HOXA1P49639 RNA5SP123-201ENST00000363244 119 ntBASIC3.62□□□□□ -1.83
HOXA1P49639 RNU6-343P-201ENST00000364709 104 ntBASIC3.62□□□□□ -1.83
HOXA1P49639 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXA1P49639 MTCO3P41-201ENST00000414801 328 ntBASIC3.62□□□□□ -1.83
HOXA1P49639 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXA1P49639 RPL30P3-201ENST00000424262 333 ntBASIC3.62□□□□□ -1.83
HOXA1P49639 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXA1P49639 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXA1P49639 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXA1P49639 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXA1P49639 USP9YP14-201ENST00000430663 563 ntBASIC3.62□□□□□ -1.83
HOXA1P49639 PRELID3BP10-201ENST00000431957 584 ntBASIC3.62□□□□□ -1.83
HOXA1P49639 NRBF2P3-201ENST00000432731 865 ntBASIC3.62□□□□□ -1.83
HOXA1P49639 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXA1P49639 MTND1P28-201ENST00000435623 950 ntBASIC3.62□□□□□ -1.83
HOXA1P49639 MTND1P34-201ENST00000438556 671 ntBASIC3.62□□□□□ -1.83
HOXA1P49639 BX322784.1-201ENST00000455793 1077 ntBASIC3.62□□□□□ -1.83
HOXA1P49639 OR9M1P-201ENST00000459641 921 ntBASIC3.62□□□□□ -1.83
HOXA1P49639 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms