Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AL139098.1-201ENST00000407291 389 ntBASIC4.84□□□□□ -1.63
COL15A1P39059 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.84□□□□□ -1.63
COL15A1P39059 RN7SKP247-201ENST00000411094 308 ntBASIC4.84□□□□□ -1.63
COL15A1P39059 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.84□□□□□ -1.63
COL15A1P39059 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.84□□□□□ -1.63
COL15A1P39059 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.84□□□□□ -1.63
COL15A1P39059 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.84□□□□□ -1.63
COL15A1P39059 KCTD9P3-201ENST00000434597 1169 ntBASIC4.84□□□□□ -1.63
COL15A1P39059 MTND6P18-201ENST00000439477 513 ntBASIC4.84□□□□□ -1.63
COL15A1P39059 AC118469.1-201ENST00000442943 488 ntBASIC4.84□□□□□ -1.63
COL15A1P39059 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.84□□□□□ -1.63
COL15A1P39059 NDUFA5P7-201ENST00000452914 242 ntBASIC4.84□□□□□ -1.63
COL15A1P39059 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.84□□□□□ -1.63
COL15A1P39059 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.84□□□□□ -1.63
COL15A1P39059 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.84□□□□□ -1.63
COL15A1P39059 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.84□□□□□ -1.63
COL15A1P39059 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.84□□□□□ -1.63
COL15A1P39059 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.84□□□□□ -1.63
COL15A1P39059 AC026427.2-201ENST00000506228 536 ntBASIC4.84□□□□□ -1.63
COL15A1P39059 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.84□□□□□ -1.63
COL15A1P39059 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.84□□□□□ -1.63
COL15A1P39059 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.84□□□□□ -1.63
COL15A1P39059 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.84□□□□□ -1.63
COL15A1P39059 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.84□□□□□ -1.63
COL15A1P39059 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.84□□□□□ -1.63
COL15A1P39059 AC103881.1-201ENST00000603476 538 ntBASIC4.84□□□□□ -1.63
COL15A1P39059 AL590229.1-201ENST00000603497 542 ntBASIC4.84□□□□□ -1.63
COL15A1P39059 AC010200.2-201ENST00000605098 235 ntBASIC4.84□□□□□ -1.63
COL15A1P39059 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.84□□□□□ -1.63
COL15A1P39059 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.84□□□□□ -1.63
COL15A1P39059 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
COL15A1P39059 AC073348.1-201ENST00000623002 331 ntBASIC4.84□□□□□ -1.63
COL15A1P39059 AC119674.1-207ENST00000641355 633 ntBASIC4.84□□□□□ -1.63
COL15A1P39059 ASNSP1-201ENST00000518311 1939 ntBASIC4.84□□□□□ -1.63
COL15A1P39059 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL15A1P39059 UBE3AP2-201ENST00000429033 2259 ntBASIC4.84□□□□□ -1.63
COL15A1P39059 PRO1804-201ENST00000623780 2050 ntBASIC4.84□□□□□ -1.64
COL15A1P39059 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
COL15A1P39059 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
COL15A1P39059 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.83□□□□□ -1.64
COL15A1P39059 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.83□□□□□ -1.64
COL15A1P39059 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL15A1P39059 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
COL15A1P39059 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.83□□□□□ -1.64
COL15A1P39059 RNU6-931P-201ENST00000363850 107 ntBASIC4.83□□□□□ -1.64
COL15A1P39059 Y_RNA.318-201ENST00000365131 97 ntBASIC4.83□□□□□ -1.64
COL15A1P39059 Y_RNA.408-201ENST00000383987 102 ntBASIC4.83□□□□□ -1.64
COL15A1P39059 SNORD116-23-201ENST00000384645 92 ntBASIC4.83□□□□□ -1.64
COL15A1P39059 RPL31P54-201ENST00000429803 370 ntBASIC4.83□□□□□ -1.64
COL15A1P39059 AL513175.1-201ENST00000431492 780 ntBASIC4.83□□□□□ -1.64
COL15A1P39059 AL357520.1-201ENST00000441557 453 ntBASIC4.83□□□□□ -1.64
COL15A1P39059 RPL23AP15-201ENST00000450202 459 ntBASIC4.83□□□□□ -1.64
COL15A1P39059 AC025445.1-201ENST00000502728 300 ntBASIC4.83□□□□□ -1.64
COL15A1P39059 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.83□□□□□ -1.64
COL15A1P39059 MTCO1P30-201ENST00000515244 580 ntBASIC4.83□□□□□ -1.64
COL15A1P39059 RNA5SP164-201ENST00000516533 110 ntBASIC4.83□□□□□ -1.64
COL15A1P39059 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
COL15A1P39059 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.83□□□□□ -1.64
COL15A1P39059 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.83□□□□□ -1.64
COL15A1P39059 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.83□□□□□ -1.64
COL15A1P39059 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.83□□□□□ -1.64
COL15A1P39059 AC037471.2-201ENST00000564941 598 ntBASIC4.83□□□□□ -1.64
COL15A1P39059 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.83□□□□□ -1.64
COL15A1P39059 VN1R92P-201ENST00000598511 928 ntBASIC4.83□□□□□ -1.64
COL15A1P39059 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.83□□□□□ -1.64
COL15A1P39059 AC010738.1-201ENST00000604970 987 ntBASIC4.83□□□□□ -1.64
COL15A1P39059 AC072039.2-201ENST00000608883 439 ntBASIC4.83□□□□□ -1.64
COL15A1P39059 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.83□□□□□ -1.64
COL15A1P39059 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL15A1P39059 PHKBP1-201ENST00000450951 1951 ntBASIC4.83□□□□□ -1.64
COL15A1P39059 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.83□□□□□ -1.64
COL15A1P39059 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL15A1P39059 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.83□□□□□ -1.64
COL15A1P39059 USP8P1-201ENST00000494673 3183 ntBASIC4.83□□□□□ -1.64
COL15A1P39059 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.83□□□□□ -1.64
COL15A1P39059 AC010329.2-201ENST00000595195 2737 ntBASIC4.83□□□□□ -1.64
COL15A1P39059 AC107982.1-201ENST00000507171 1300 ntBASIC4.83□□□□□ -1.64
COL15A1P39059 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL15A1P39059 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL15A1P39059 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
COL15A1P39059 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL15A1P39059 AC019155.1-201ENST00000382242 574 ntBASIC4.82□□□□□ -1.64
COL15A1P39059 Y_RNA.560-201ENST00000384689 102 ntBASIC4.82□□□□□ -1.64
COL15A1P39059 MIR93-201ENST00000385024 80 ntBASIC4.82□□□□□ -1.64
COL15A1P39059 RNA5SP306-201ENST00000411087 107 ntBASIC4.82□□□□□ -1.64
COL15A1P39059 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.82□□□□□ -1.64
COL15A1P39059 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.82□□□□□ -1.64
COL15A1P39059 AL606662.1-201ENST00000445763 553 ntBASIC4.82□□□□□ -1.64
COL15A1P39059 RPS27AP8-201ENST00000452665 445 ntBASIC4.82□□□□□ -1.64
COL15A1P39059 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.82□□□□□ -1.64
COL15A1P39059 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
COL15A1P39059 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.82□□□□□ -1.64
COL15A1P39059 ACTG1P13-201ENST00000486987 1043 ntBASIC4.82□□□□□ -1.64
COL15A1P39059 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.82□□□□□ -1.64
COL15A1P39059 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.82□□□□□ -1.64
COL15A1P39059 RNU6-678P-201ENST00000516832 109 ntBASIC4.82□□□□□ -1.64
COL15A1P39059 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.82□□□□□ -1.64
COL15A1P39059 OR5B10P-201ENST00000532869 642 ntBASIC4.82□□□□□ -1.64
COL15A1P39059 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.82□□□□□ -1.64
COL15A1P39059 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms