Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC128657.1-201ENST00000549459 145 ntBASIC4.98□□□□□ -1.61
HOXC12P31275 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXC12P31275 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.98□□□□□ -1.61
HOXC12P31275 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXC12P31275 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.98□□□□□ -1.61
HOXC12P31275 AC096996.1-201ENST00000563813 325 ntBASIC4.98□□□□□ -1.61
HOXC12P31275 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXC12P31275 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXC12P31275 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXC12P31275 AC243960.4-201ENST00000600532 288 ntBASIC4.98□□□□□ -1.61
HOXC12P31275 AL512329.2-201ENST00000607350 548 ntBASIC4.98□□□□□ -1.61
HOXC12P31275 AC093913.1-201ENST00000614178 329 ntBASIC4.98□□□□□ -1.61
HOXC12P31275 AP001784.1-201ENST00000624107 428 ntBASIC4.98□□□□□ -1.61
HOXC12P31275 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXC12P31275 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC12P31275 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXC12P31275 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC12P31275 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC12P31275 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
HOXC12P31275 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC12P31275 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC12P31275 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HOXC12P31275 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC12P31275 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HOXC12P31275 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXC12P31275 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXC12P31275 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXC12P31275 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXC12P31275 AC011504.1-201ENST00000623331 4103 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 AL359955.1-201ENST00000455242 3275 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HOXC12P31275 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXC12P31275 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HOXC12P31275 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 Y_RNA.22-201ENST00000362492 102 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 Y_RNA.166-201ENST00000363730 102 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 RN7SKP6-201ENST00000364795 319 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 RNU6-339P-201ENST00000384310 107 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 MIR558-201ENST00000384920 94 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 MIR223-201ENST00000385204 110 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 AL356057.2-201ENST00000403318 432 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 FAT1P1-201ENST00000406588 507 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 RN7SKP125-201ENST00000410481 302 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 RNU2-47P-201ENST00000410649 186 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 RPL23AP27-201ENST00000415161 451 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXC12P31275 AC009161.1-201ENST00000417306 376 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXC12P31275 AL353678.1-201ENST00000422735 741 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 AL139148.1-201ENST00000427122 680 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 HMGN2P27-201ENST00000427352 270 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXC12P31275 AC092162.1-201ENST00000432828 434 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 AL390119.1-201ENST00000440329 312 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXC12P31275 AC073415.1-201ENST00000449240 153 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 GMFBP1-201ENST00000467831 427 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 RN7SL547P-201ENST00000490793 290 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 RPL38P4-201ENST00000502376 214 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 AC024558.1-201ENST00000505008 528 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 HIGD1AP14-201ENST00000507617 282 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.97□□□□□ -1.61
HOXC12P31275 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXC12P31275 RNU2-10P-201ENST00000516375 211 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 PTP4A1P6-201ENST00000531034 478 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXC12P31275 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXC12P31275 GSTP1P1-201ENST00000548078 319 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXC12P31275 AC078814.3-201ENST00000553036 491 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 AC068831.4-201ENST00000556118 109 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 AL355812.1-201ENST00000603215 216 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 AC064836.2-201ENST00000609491 462 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXC12P31275 AL132765.2-201ENST00000610812 351 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 AC130324.3-201ENST00000614165 542 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 RPSAP73-201ENST00000614820 330 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 AC090617.10-201ENST00000624308 134 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 AP000843.1-201ENST00000624880 701 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXC12P31275 MIR4496-201ENST00000635896 61 ntBASIC4.97□□□□□ -1.61
HOXC12P31275 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.97□□□□□ -1.61
HOXC12P31275 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXC12P31275 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXC12P31275 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HOXC12P31275 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
HOXC12P31275 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXC12P31275 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXC12P31275 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
HOXC12P31275 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
HOXC12P31275 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXC12P31275 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXC12P31275 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
HOXC12P31275 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
HOXC12P31275 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
HOXC12P31275 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
HOXC12P31275 AL592182.3-201ENST00000642132 3304 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HOXC12P31275 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
HOXC12P31275 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms