Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 COX6CP2-201ENST00000444980 225 ntBASIC3.97□□□□□ -1.77
CLIP1P30622 FDX1P2-201ENST00000450769 375 ntBASIC3.97□□□□□ -1.77
CLIP1P30622 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.97□□□□□ -1.77
CLIP1P30622 AC092185.1-201ENST00000491371 97 ntBASIC3.97□□□□□ -1.77
CLIP1P30622 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.97□□□□□ -1.77
CLIP1P30622 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.97□□□□□ -1.77
CLIP1P30622 AP000916.1-201ENST00000533869 835 ntBASIC3.97□□□□□ -1.77
CLIP1P30622 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLIP1P30622 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.97□□□□□ -1.77
CLIP1P30622 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.97□□□□□ -1.77
CLIP1P30622 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.97□□□□□ -1.77
CLIP1P30622 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLIP1P30622 AC021755.1-201ENST00000559747 1447 ntBASIC3.97□□□□□ -1.77
CLIP1P30622 AL513175.2-201ENST00000422071 443 ntBASIC3.96□□□□□ -1.77
CLIP1P30622 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.77
CLIP1P30622 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.96□□□□□ -1.77
CLIP1P30622 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.96□□□□□ -1.77
CLIP1P30622 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.96□□□□□ -1.77
CLIP1P30622 IGKV3-31-201ENST00000523109 329 ntBASIC3.96□□□□□ -1.77
CLIP1P30622 MIR5092-201ENST00000583139 88 ntBASIC3.96□□□□□ -1.77
CLIP1P30622 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.96□□□□□ -1.77
CLIP1P30622 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.96□□□□□ -1.77
CLIP1P30622 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CLIP1P30622 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLIP1P30622 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CLIP1P30622 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.96□□□□□ -1.78
CLIP1P30622 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLIP1P30622 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CLIP1P30622 EIF5P1-201ENST00000400019 1231 ntBASIC3.95□□□□□ -1.78
CLIP1P30622 UBE2D3P1-201ENST00000436669 444 ntBASIC3.95□□□□□ -1.78
CLIP1P30622 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.95□□□□□ -1.78
CLIP1P30622 AC021205.1-201ENST00000468797 348 ntBASIC3.95□□□□□ -1.78
CLIP1P30622 AC234781.5-201ENST00000508429 271 ntBASIC3.95□□□□□ -1.78
CLIP1P30622 VTA1P2-201ENST00000520205 911 ntBASIC3.95□□□□□ -1.78
CLIP1P30622 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.95□□□□□ -1.78
CLIP1P30622 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP1P30622 AC067852.7-201ENST00000623270 535 ntBASIC3.95□□□□□ -1.78
CLIP1P30622 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLIP1P30622 AC063923.1-201ENST00000478982 1619 ntBASIC3.95□□□□□ -1.78
CLIP1P30622 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CLIP1P30622 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLIP1P30622 SNORD21-201ENST00000383953 95 ntBASIC3.95□□□□□ -1.78
CLIP1P30622 EI24P2-201ENST00000397776 1076 ntBASIC3.95□□□□□ -1.78
CLIP1P30622 RNU4-53P-201ENST00000410828 140 ntBASIC3.95□□□□□ -1.78
CLIP1P30622 NDUFB4P5-201ENST00000415445 361 ntBASIC3.95□□□□□ -1.78
CLIP1P30622 AL390023.1-201ENST00000428836 262 ntBASIC3.95□□□□□ -1.78
CLIP1P30622 SNORA70.14-201ENST00000516205 110 ntBASIC3.95□□□□□ -1.78
CLIP1P30622 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.95□□□□□ -1.78
CLIP1P30622 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.95□□□□□ -1.78
CLIP1P30622 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLIP1P30622 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP1P30622 VN1R79P-201ENST00000593540 513 ntBASIC3.95□□□□□ -1.78
CLIP1P30622 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP1P30622 AC084035.1-201ENST00000634543 607 ntBASIC3.95□□□□□ -1.78
CLIP1P30622 MIR6733-201ENST00000635723 61 ntBASIC3.95□□□□□ -1.78
CLIP1P30622 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CLIP1P30622 OR56A5-201ENST00000340110 738 ntBASIC3.94□□□□□ -1.78
CLIP1P30622 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
CLIP1P30622 RNA5SP456-201ENST00000364002 114 ntBASIC3.94□□□□□ -1.78
CLIP1P30622 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.94□□□□□ -1.78
CLIP1P30622 RN7SKP223-201ENST00000410582 62 ntBASIC3.94□□□□□ -1.78
CLIP1P30622 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.94□□□□□ -1.78
CLIP1P30622 AL135786.1-201ENST00000415892 214 ntBASIC3.94□□□□□ -1.78
CLIP1P30622 AIMP1P1-201ENST00000418670 937 ntBASIC3.94□□□□□ -1.78
CLIP1P30622 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLIP1P30622 snoU13.26-201ENST00000459452 105 ntBASIC3.94□□□□□ -1.78
CLIP1P30622 RPL21P71-201ENST00000465598 459 ntBASIC3.94□□□□□ -1.78
CLIP1P30622 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.94□□□□□ -1.78
CLIP1P30622 CKS1BP1-201ENST00000555221 240 ntBASIC3.94□□□□□ -1.78
CLIP1P30622 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.94□□□□□ -1.78
CLIP1P30622 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLIP1P30622 OR4G1P-202ENST00000641173 1788 ntBASIC3.93□□□□□ -1.78
CLIP1P30622 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CLIP1P30622 RNU6-618P-201ENST00000363518 112 ntBASIC3.93□□□□□ -1.78
CLIP1P30622 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLIP1P30622 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLIP1P30622 AL590290.1-201ENST00000405336 380 ntBASIC3.93□□□□□ -1.78
CLIP1P30622 AL162578.1-201ENST00000406202 378 ntBASIC3.93□□□□□ -1.78
CLIP1P30622 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.93□□□□□ -1.78
CLIP1P30622 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.93□□□□□ -1.78
CLIP1P30622 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.93□□□□□ -1.78
CLIP1P30622 MTCO1P39-201ENST00000426148 480 ntBASIC3.93□□□□□ -1.78
CLIP1P30622 CACYBPP1-201ENST00000438592 684 ntBASIC3.93□□□□□ -1.78
CLIP1P30622 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.93□□□□□ -1.78
CLIP1P30622 AC090819.1-201ENST00000523800 1111 ntBASIC3.93□□□□□ -1.78
CLIP1P30622 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CLIP1P30622 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.93□□□□□ -1.78
CLIP1P30622 AC010928.3-201ENST00000587712 541 ntBASIC3.93□□□□□ -1.78
CLIP1P30622 BNIP3P10-201ENST00000605360 577 ntBASIC3.93□□□□□ -1.78
CLIP1P30622 BX664608.1-201ENST00000610519 487 ntBASIC3.93□□□□□ -1.78
CLIP1P30622 AC079228.1-201ENST00000624774 1049 ntBASIC3.93□□□□□ -1.78
CLIP1P30622 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLIP1P30622 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLIP1P30622 AL133412.1-201ENST00000380194 2992 ntBASIC3.92□□□□□ -1.78
CLIP1P30622 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLIP1P30622 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLIP1P30622 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
CLIP1P30622 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.92□□□□□ -1.78
CLIP1P30622 RNA5SP425-201ENST00000410336 112 ntBASIC3.92□□□□□ -1.78
CLIP1P30622 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms