Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RXRBP28702 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
RXRBP28702 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
RXRBP28702 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC6.17□□□□□ -1.42
RXRBP28702 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
RXRBP28702 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RXRBP28702 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RXRBP28702 MTCO1P9-201ENST00000505577 1534 ntBASIC6.17□□□□□ -1.42
RXRBP28702 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
RXRBP28702 U8.14-201ENST00000390843 143 ntBASIC6.17□□□□□ -1.42
RXRBP28702 OR51A3P-201ENST00000413596 924 ntBASIC6.17□□□□□ -1.42
RXRBP28702 GPM6BP2-201ENST00000432046 144 ntBASIC6.17□□□□□ -1.42
RXRBP28702 RPL7P29-201ENST00000437151 728 ntBASIC6.17□□□□□ -1.42
RXRBP28702 GPM6BP1-201ENST00000446387 144 ntBASIC6.17□□□□□ -1.42
RXRBP28702 AC140076.1-201ENST00000449897 361 ntBASIC6.17□□□□□ -1.42
RXRBP28702 AL590365.1-201ENST00000450788 243 ntBASIC6.17□□□□□ -1.42
RXRBP28702 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC6.17□□□□□ -1.42
RXRBP28702 AL691482.1-201ENST00000453255 87 ntBASIC6.17□□□□□ -1.42
RXRBP28702 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC6.17□□□□□ -1.42
RXRBP28702 HMGB1P28-201ENST00000507778 552 ntBASIC6.17□□□□□ -1.42
RXRBP28702 AC110768.1-201ENST00000509222 400 ntBASIC6.17□□□□□ -1.42
RXRBP28702 AC110792.2-201ENST00000510278 224 ntBASIC6.17□□□□□ -1.42
RXRBP28702 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC6.17□□□□□ -1.42
RXRBP28702 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC6.17□□□□□ -1.42
RXRBP28702 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC6.17□□□□□ -1.42
RXRBP28702 AP005597.4-201ENST00000526762 229 ntBASIC6.17□□□□□ -1.42
RXRBP28702 AC011712.1-201ENST00000588959 234 ntBASIC6.17□□□□□ -1.42
RXRBP28702 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC6.17□□□□□ -1.42
RXRBP28702 PRELID3BP8-201ENST00000604148 295 ntBASIC6.17□□□□□ -1.42
RXRBP28702 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.17□□□□□ -1.42
RXRBP28702 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC6.17□□□□□ -1.42
RXRBP28702 AC116563.2-201ENST00000624751 535 ntBASIC6.17□□□□□ -1.42
RXRBP28702 ZNF33BP1-201ENST00000452497 1834 ntBASIC6.17□□□□□ -1.42
RXRBP28702 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.17□□□□□ -1.42
RXRBP28702 OR5BR1P-201ENST00000524992 1330 ntBASIC6.17□□□□□ -1.42
RXRBP28702 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RXRBP28702 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
RXRBP28702 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
RXRBP28702 LARP1BP1-201ENST00000506036 1359 ntBASIC6.17□□□□□ -1.42
RXRBP28702 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
RXRBP28702 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RXRBP28702 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
RXRBP28702 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
RXRBP28702 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RXRBP28702 OR52B1P-201ENST00000316506 909 ntBASIC6.16□□□□□ -1.42
RXRBP28702 RNU6-462P-201ENST00000362659 105 ntBASIC6.16□□□□□ -1.42
RXRBP28702 RNU6-451P-201ENST00000362921 107 ntBASIC6.16□□□□□ -1.42
RXRBP28702 U8.3-201ENST00000363321 132 ntBASIC6.16□□□□□ -1.42
RXRBP28702 RNY3P3-201ENST00000363816 102 ntBASIC6.16□□□□□ -1.42
RXRBP28702 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC6.16□□□□□ -1.42
RXRBP28702 SUGT1P1-201ENST00000379514 476 ntBASIC6.16□□□□□ -1.42
RXRBP28702 PEX12P1-201ENST00000400284 1048 ntBASIC6.16□□□□□ -1.42
RXRBP28702 Z98745.1-201ENST00000402553 494 ntBASIC6.16□□□□□ -1.42
RXRBP28702 AL603766.1-201ENST00000407763 664 ntBASIC6.16□□□□□ -1.42
RXRBP28702 RNU6-195P-201ENST00000411352 109 ntBASIC6.16□□□□□ -1.42
RXRBP28702 AC062016.2-201ENST00000420950 676 ntBASIC6.16□□□□□ -1.42
RXRBP28702 AL353193.1-201ENST00000421444 268 ntBASIC6.16□□□□□ -1.42
RXRBP28702 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC6.16□□□□□ -1.42
RXRBP28702 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RXRBP28702 ARPC3P5-201ENST00000448802 534 ntBASIC6.16□□□□□ -1.42
RXRBP28702 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC6.16□□□□□ -1.42
RXRBP28702 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC6.16□□□□□ -1.42
RXRBP28702 BX248409.1-201ENST00000455497 255 ntBASIC6.16□□□□□ -1.42
RXRBP28702 RNU6-420P-201ENST00000458780 107 ntBASIC6.16□□□□□ -1.42
RXRBP28702 AC010307.1-201ENST00000467206 836 ntBASIC6.16□□□□□ -1.42
RXRBP28702 RPL35P6-201ENST00000490024 372 ntBASIC6.16□□□□□ -1.42
RXRBP28702 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC6.16□□□□□ -1.42
RXRBP28702 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.16□□□□□ -1.42
RXRBP28702 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
RXRBP28702 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC6.16□□□□□ -1.42
RXRBP28702 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
RXRBP28702 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC6.16□□□□□ -1.42
RXRBP28702 HSPA8P13-201ENST00000523715 472 ntBASIC6.16□□□□□ -1.42
RXRBP28702 AP002812.4-201ENST00000532139 286 ntBASIC6.16□□□□□ -1.42
RXRBP28702 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC6.16□□□□□ -1.42
RXRBP28702 AC141257.3-201ENST00000572906 215 ntBASIC6.16□□□□□ -1.42
RXRBP28702 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RXRBP28702 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC6.16□□□□□ -1.42
RXRBP28702 AC018638.8-201ENST00000588755 281 ntBASIC6.16□□□□□ -1.42
RXRBP28702 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC6.16□□□□□ -1.42
RXRBP28702 AL122125.1-201ENST00000616999 600 ntBASIC6.16□□□□□ -1.42
RXRBP28702 AC139792.3-201ENST00000623525 224 ntBASIC6.16□□□□□ -1.42
RXRBP28702 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.16□□□□□ -1.42
RXRBP28702 TEX41-300ENST00000631048 69 ntTSL 5 BASIC6.16□□□□□ -1.42
RXRBP28702 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC6.16□□□□□ -1.42
RXRBP28702 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RXRBP28702 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
RXRBP28702 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
RXRBP28702 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RXRBP28702 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.16□□□□□ -1.42
RXRBP28702 AC073346.2-201ENST00000624724 2058 ntBASIC6.16□□□□□ -1.42
RXRBP28702 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RXRBP28702 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RXRBP28702 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
RXRBP28702 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RXRBP28702 GTF2H2B-203ENST00000508065 1432 ntBASIC6.16□□□□□ -1.42
RXRBP28702 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RXRBP28702 MAPK10-304ENST00000641341 3984 ntBASIC6.16□□□□□ -1.42
RXRBP28702 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
RXRBP28702 AC125257.1-201ENST00000560400 2930 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms