Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SNORA23-201ENST00000365128 182 ntBASIC6.23□□□□□ -1.41
VARSP26640 RNU6-398P-201ENST00000384143 109 ntBASIC6.23□□□□□ -1.41
VARSP26640 RNA5SP198-201ENST00000410376 127 ntBASIC6.23□□□□□ -1.41
VARSP26640 AC116036.1-201ENST00000412199 367 ntBASIC6.23□□□□□ -1.41
VARSP26640 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.23□□□□□ -1.41
VARSP26640 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.23□□□□□ -1.41
VARSP26640 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.23□□□□□ -1.41
VARSP26640 AL158071.1-201ENST00000430315 461 ntBASIC6.23□□□□□ -1.41
VARSP26640 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.23□□□□□ -1.41
VARSP26640 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC6.23□□□□□ -1.41
VARSP26640 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.23□□□□□ -1.41
VARSP26640 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.23□□□□□ -1.41
VARSP26640 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.23□□□□□ -1.41
VARSP26640 OR2AQ1P-201ENST00000451972 200 ntBASIC6.23□□□□□ -1.41
VARSP26640 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.23□□□□□ -1.41
VARSP26640 SNORD97-201ENST00000459187 142 ntBASIC6.23□□□□□ -1.41
VARSP26640 AC018638.3-201ENST00000461273 132 ntBASIC6.23□□□□□ -1.41
VARSP26640 AC087884.1-201ENST00000469738 328 ntBASIC6.23□□□□□ -1.41
VARSP26640 AC112484.3-201ENST00000505910 329 ntBASIC6.23□□□□□ -1.41
VARSP26640 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC6.23□□□□□ -1.41
VARSP26640 AP003733.2-201ENST00000529409 171 ntBASIC6.23□□□□□ -1.41
VARSP26640 AC015720.2-201ENST00000567709 334 ntBASIC6.23□□□□□ -1.41
VARSP26640 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.23□□□□□ -1.41
VARSP26640 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.23□□□□□ -1.41
VARSP26640 AC233702.7-202ENST00000582941 211 ntBASIC6.23□□□□□ -1.41
VARSP26640 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.23□□□□□ -1.41
VARSP26640 AC006557.5-201ENST00000603126 811 ntBASIC6.23□□□□□ -1.41
VARSP26640 AC004805.3-201ENST00000603178 310 ntBASIC6.23□□□□□ -1.41
VARSP26640 AL138889.2-201ENST00000603883 242 ntBASIC6.23□□□□□ -1.41
VARSP26640 AC012368.3-201ENST00000604190 219 ntBASIC6.23□□□□□ -1.41
VARSP26640 AC243654.2-201ENST00000612843 443 ntBASIC6.23□□□□□ -1.41
VARSP26640 AC130454.1-201ENST00000622948 401 ntBASIC6.23□□□□□ -1.41
VARSP26640 AL132640.3-201ENST00000630473 177 ntBASIC6.23□□□□□ -1.41
VARSP26640 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.23□□□□□ -1.41
VARSP26640 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VARSP26640 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.23□□□□□ -1.41
VARSP26640 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
VARSP26640 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VARSP26640 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.23□□□□□ -1.41
VARSP26640 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
VARSP26640 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VARSP26640 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VARSP26640 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.23□□□□□ -1.41
VARSP26640 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.23□□□□□ -1.41
VARSP26640 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.22□□□□□ -1.41
VARSP26640 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.22□□□□□ -1.41
VARSP26640 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VARSP26640 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VARSP26640 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.22□□□□□ -1.41
VARSP26640 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VARSP26640 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
VARSP26640 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VARSP26640 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
VARSP26640 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
VARSP26640 RNY3P11-201ENST00000364153 102 ntBASIC6.22□□□□□ -1.41
VARSP26640 RNA5SP433-201ENST00000364491 114 ntBASIC6.22□□□□□ -1.41
VARSP26640 RNU4-42P-201ENST00000364738 142 ntBASIC6.22□□□□□ -1.41
VARSP26640 RNU1-84P-201ENST00000365447 164 ntBASIC6.22□□□□□ -1.41
VARSP26640 Y_RNA.464-201ENST00000384282 110 ntBASIC6.22□□□□□ -1.41
VARSP26640 RNA5SP122-201ENST00000384457 108 ntBASIC6.22□□□□□ -1.41
VARSP26640 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VARSP26640 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.22□□□□□ -1.41
VARSP26640 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC6.22□□□□□ -1.41
VARSP26640 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC6.22□□□□□ -1.41
VARSP26640 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.22□□□□□ -1.41
VARSP26640 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.22□□□□□ -1.41
VARSP26640 SNX18P26-201ENST00000458433 740 ntBASIC6.22□□□□□ -1.41
VARSP26640 SNORD121B-201ENST00000458838 81 ntBASIC6.22□□□□□ -1.41
VARSP26640 OARD1-209ENST00000471367 401 ntTSL 2 BASIC6.22□□□□□ -1.41
VARSP26640 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.22□□□□□ -1.41
VARSP26640 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.22□□□□□ -1.41
VARSP26640 RNU6-255P-201ENST00000516957 105 ntBASIC6.22□□□□□ -1.41
VARSP26640 AC007991.1-201ENST00000522680 631 ntBASIC6.22□□□□□ -1.41
VARSP26640 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.22□□□□□ -1.41
VARSP26640 AC084121.1-201ENST00000533882 835 ntBASIC6.22□□□□□ -1.41
VARSP26640 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC6.22□□□□□ -1.41
VARSP26640 MIR4504-201ENST00000577413 92 ntBASIC6.22□□□□□ -1.41
VARSP26640 AC010900.2-201ENST00000604508 210 ntBASIC6.22□□□□□ -1.41
VARSP26640 AL589743.6-201ENST00000611025 117 ntBASIC6.22□□□□□ -1.41
VARSP26640 MIR6085-201ENST00000618314 110 ntBASIC6.22□□□□□ -1.41
VARSP26640 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
VARSP26640 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.22□□□□□ -1.41
VARSP26640 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
VARSP26640 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.22□□□□□ -1.41
VARSP26640 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VARSP26640 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
VARSP26640 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
VARSP26640 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
VARSP26640 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
VARSP26640 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
VARSP26640 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
VARSP26640 AL034546.1-201ENST00000623740 3693 ntBASIC6.21□□□□□ -1.41
VARSP26640 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
VARSP26640 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.41
VARSP26640 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
VARSP26640 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
VARSP26640 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
VARSP26640 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
VARSP26640 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VARSP26640 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms