Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC099785.1-201ENST00000605697 437 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
XRCC1P18887 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
XRCC1P18887 AC092628.2-201ENST00000622492 339 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.46□□□□□ -1.86
XRCC1P18887 AL138960.2-201ENST00000625145 535 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.46□□□□□ -1.86
XRCC1P18887 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.46□□□□□ -1.86
XRCC1P18887 U6.105-201ENST00000637379 88 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
XRCC1P18887 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
XRCC1P18887 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.46□□□□□ -1.86
XRCC1P18887 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.46□□□□□ -1.86
XRCC1P18887 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
XRCC1P18887 PABPC1P7-201ENST00000413177 1513 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 MTCO1P12-201ENST00000414273 1543 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
XRCC1P18887 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
XRCC1P18887 AL513302.2-201ENST00000562313 1842 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.45□□□□□ -1.86
XRCC1P18887 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
XRCC1P18887 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
XRCC1P18887 RNU6-441P-201ENST00000384545 106 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.45□□□□□ -1.86
XRCC1P18887 MTCO3P31-201ENST00000405526 789 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 U3.39-201ENST00000408569 239 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 BX842559.1-201ENST00000419615 532 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 RPS15AP6-201ENST00000420703 385 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 SFR1P2-201ENST00000421841 730 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.45□□□□□ -1.86
XRCC1P18887 AC006946.1-201ENST00000429106 328 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 MRPS18BP2-201ENST00000434310 759 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.45□□□□□ -1.86
XRCC1P18887 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.45□□□□□ -1.86
XRCC1P18887 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
XRCC1P18887 U3.44-201ENST00000458938 192 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.45□□□□□ -1.86
XRCC1P18887 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
XRCC1P18887 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.45□□□□□ -1.86
XRCC1P18887 AC008427.1-201ENST00000503102 655 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
XRCC1P18887 MIR2276-201ENST00000516886 89 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 AP003102.1-201ENST00000525638 661 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
XRCC1P18887 AL389895.1-201ENST00000554127 252 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.45□□□□□ -1.86
XRCC1P18887 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.45□□□□□ -1.86
XRCC1P18887 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
XRCC1P18887 AC090666.1-201ENST00000578241 445 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.45□□□□□ -1.86
XRCC1P18887 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.45□□□□□ -1.86
XRCC1P18887 AC011492.1-201ENST00000600023 315 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.45□□□□□ -1.86
XRCC1P18887 YWHAQP7-201ENST00000603536 658 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 AL009028.1-201ENST00000604895 802 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 AC018645.2-201ENST00000609151 472 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 RNU6-1192P-201ENST00000612197 107 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 RNU6-489P-201ENST00000618289 107 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 VN1R7P-201ENST00000619242 903 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 MIR7975-201ENST00000619350 68 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 XIST_intron.1-201ENST00000619444 68 ntBASIC3.45□□□□□ -1.86
XRCC1P18887 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.45□□□□□ -1.86
XRCC1P18887 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
XRCC1P18887 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.45□□□□□ -1.86
XRCC1P18887 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
XRCC1P18887 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.45□□□□□ -1.86
XRCC1P18887 MFSD8-233ENST00000641482 4860 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
XRCC1P18887 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
XRCC1P18887 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 RNA5SP50-201ENST00000363731 107 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 RNA5SP72-201ENST00000364442 117 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
XRCC1P18887 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.44□□□□□ -1.86
XRCC1P18887 GSTA8P-201ENST00000404253 637 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 AL355379.1-201ENST00000405542 640 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
XRCC1P18887 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.44□□□□□ -1.86
XRCC1P18887 MTND4P22-201ENST00000413116 1169 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 AC068533.1-201ENST00000418542 415 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 DBIP2-201ENST00000419076 262 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 GLRXP1-201ENST00000423261 334 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 RPP40P1-201ENST00000426762 456 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.44□□□□□ -1.86
XRCC1P18887 ATP5JP1-201ENST00000431631 322 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.44□□□□□ -1.86
XRCC1P18887 CKS1BP5-201ENST00000434172 273 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.44□□□□□ -1.86
XRCC1P18887 RPL7P59-201ENST00000447700 943 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 PRSS3P4-201ENST00000453323 162 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.44□□□□□ -1.86
XRCC1P18887 GAPDHP39-201ENST00000481866 979 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.44□□□□□ -1.86
XRCC1P18887 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.44□□□□□ -1.86
XRCC1P18887 AC048346.1-201ENST00000510247 144 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.44□□□□□ -1.86
XRCC1P18887 HIGD1AP3-201ENST00000515857 278 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 RNA5SP135-201ENST00000517019 125 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms