Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3□□□□□ -1.93
UBCP0CG48 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3□□□□□ -1.93
UBCP0CG48 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3□□□□□ -1.93
UBCP0CG48 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.99□□□□□ -1.93
UBCP0CG48 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
UBCP0CG48 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
UBCP0CG48 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
UBCP0CG48 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
UBCP0CG48 RNU6-792P-201ENST00000363490 107 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 U3.11-201ENST00000364476 212 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 RNA5SP51-201ENST00000364750 119 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC2.99□□□□□ -1.93
UBCP0CG48 MIR141-201ENST00000384975 95 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 SAR1AP2-201ENST00000392696 594 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 RNU4-27P-201ENST00000410889 139 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 Z99755.1-201ENST00000414048 380 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
UBCP0CG48 AC012498.1-201ENST00000424037 437 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.99□□□□□ -1.93
UBCP0CG48 GOT2P5-201ENST00000433995 546 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.99□□□□□ -1.93
UBCP0CG48 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.99□□□□□ -1.93
UBCP0CG48 AC009969.1-201ENST00000438726 172 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.99□□□□□ -1.93
UBCP0CG48 HSPE1P28-201ENST00000443139 211 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 GTF2IP12-201ENST00000456547 356 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.99□□□□□ -1.93
UBCP0CG48 AC089999.1-201ENST00000460336 374 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 AC091179.1-201ENST00000461606 579 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 RPS23P3-201ENST00000470993 430 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 RPL7P5-201ENST00000471472 736 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.99□□□□□ -1.93
UBCP0CG48 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
UBCP0CG48 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.99□□□□□ -1.93
UBCP0CG48 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.99□□□□□ -1.93
UBCP0CG48 RNU6-362P-201ENST00000516736 90 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.99□□□□□ -1.93
UBCP0CG48 OSBPL9P3-201ENST00000534523 595 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.99□□□□□ -1.93
UBCP0CG48 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.99□□□□□ -1.93
UBCP0CG48 AC136624.4-201ENST00000573044 370 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC2.99□□□□□ -1.93
UBCP0CG48 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.99□□□□□ -1.93
UBCP0CG48 AC010591.1-201ENST00000603941 649 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 MIR378J-201ENST00000611988 109 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 VN1R9P-201ENST00000614184 867 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.99□□□□□ -1.93
UBCP0CG48 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.99□□□□□ -1.93
UBCP0CG48 AC119674.1-207ENST00000641355 633 ntBASIC2.99□□□□□ -1.93
UBCP0CG48 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
UBCP0CG48 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
UBCP0CG48 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
UBCP0CG48 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.98□□□□□ -1.93
UBCP0CG48 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
UBCP0CG48 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
UBCP0CG48 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
UBCP0CG48 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.98□□□□□ -1.93
UBCP0CG48 DYNLT3P1-201ENST00000378574 347 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 U8.11-201ENST00000384699 133 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 U8.12-201ENST00000384701 133 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 MIR16-1-201ENST00000385271 89 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 AL121978.1-201ENST00000402778 359 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 AL354719.1-201ENST00000406535 843 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 RN7SKP111-201ENST00000410349 271 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.98□□□□□ -1.93
UBCP0CG48 RPS20P25-201ENST00000412447 352 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.98□□□□□ -1.93
UBCP0CG48 AL445183.3-201ENST00000414168 502 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 SDCBPP3-201ENST00000419629 891 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.98□□□□□ -1.93
UBCP0CG48 RPL7P46-201ENST00000425129 740 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.98□□□□□ -1.93
UBCP0CG48 AC233728.2-201ENST00000425348 757 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 AL035410.1-201ENST00000427409 427 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 RPL21P40-201ENST00000428586 483 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 KCTD10P1-201ENST00000434203 625 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.98□□□□□ -1.93
UBCP0CG48 ISCA1P2-201ENST00000438679 421 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.98□□□□□ -1.93
UBCP0CG48 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC2.98□□□□□ -1.93
UBCP0CG48 TRIM60P18-201ENST00000441518 828 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 RRM2P4-201ENST00000441721 562 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 RPL7P59-201ENST00000447700 943 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.98□□□□□ -1.93
UBCP0CG48 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.98□□□□□ -1.93
UBCP0CG48 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.98□□□□□ -1.93
UBCP0CG48 TRBV26-201ENST00000456572 344 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 U8.18-201ENST00000459285 133 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 AL136126.1-201ENST00000473603 402 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 RPS4XP6-201ENST00000477670 797 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 CEACAMP10-202ENST00000495431 496 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.98□□□□□ -1.93
UBCP0CG48 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.98□□□□□ -1.93
UBCP0CG48 AC112198.1-201ENST00000505369 1220 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 RN7SKP18-201ENST00000516005 275 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 RNU6-1102P-201ENST00000516149 96 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 SNORA70.18-201ENST00000516696 98 ntBASIC2.98□□□□□ -1.93
UBCP0CG48 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.98□□□□□ -1.93
UBCP0CG48 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.98□□□□□ -1.93
UBCP0CG48 HMGB1P1-201ENST00000522557 636 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms