Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.86□□□□□ -1.47
RAPGEF3O95398 AL136133.1-201ENST00000413694 376 ntBASIC5.86□□□□□ -1.47
RAPGEF3O95398 OR2AH1P-201ENST00000425717 928 ntBASIC5.86□□□□□ -1.47
RAPGEF3O95398 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.86□□□□□ -1.47
RAPGEF3O95398 AL353706.1-201ENST00000436728 494 ntBASIC5.86□□□□□ -1.47
RAPGEF3O95398 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.86□□□□□ -1.47
RAPGEF3O95398 MTND2P20-201ENST00000440805 661 ntBASIC5.86□□□□□ -1.47
RAPGEF3O95398 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RAPGEF3O95398 AC109486.1-201ENST00000486833 374 ntBASIC5.86□□□□□ -1.47
RAPGEF3O95398 AC010424.1-201ENST00000506336 297 ntBASIC5.86□□□□□ -1.47
RAPGEF3O95398 LTV1P1-201ENST00000510683 1237 ntBASIC5.86□□□□□ -1.47
RAPGEF3O95398 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.86□□□□□ -1.47
RAPGEF3O95398 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.86□□□□□ -1.47
RAPGEF3O95398 SNORA48.10-201ENST00000516965 160 ntBASIC5.86□□□□□ -1.47
RAPGEF3O95398 RNA5SP230-201ENST00000517039 122 ntBASIC5.86□□□□□ -1.47
RAPGEF3O95398 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.86□□□□□ -1.47
RAPGEF3O95398 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.86□□□□□ -1.47
RAPGEF3O95398 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RAPGEF3O95398 SLC2A13P1-201ENST00000531560 322 ntBASIC5.86□□□□□ -1.47
RAPGEF3O95398 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.86□□□□□ -1.47
RAPGEF3O95398 AC092851.1-201ENST00000535964 478 ntBASIC5.86□□□□□ -1.47
RAPGEF3O95398 AL512347.1-201ENST00000566420 503 ntBASIC5.86□□□□□ -1.47
RAPGEF3O95398 AC073544.2-201ENST00000601155 540 ntBASIC5.86□□□□□ -1.47
RAPGEF3O95398 AC123786.2-201ENST00000603459 275 ntBASIC5.86□□□□□ -1.47
RAPGEF3O95398 YPEL5P2-201ENST00000605553 359 ntBASIC5.86□□□□□ -1.47
RAPGEF3O95398 MIR7844-201ENST00000616161 122 ntBASIC5.86□□□□□ -1.47
RAPGEF3O95398 AC120349.2-201ENST00000625002 298 ntBASIC5.86□□□□□ -1.47
RAPGEF3O95398 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.86□□□□□ -1.47
RAPGEF3O95398 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.86□□□□□ -1.47
RAPGEF3O95398 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.86□□□□□ -1.47
RAPGEF3O95398 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.86□□□□□ -1.47
RAPGEF3O95398 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RAPGEF3O95398 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RAPGEF3O95398 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.86□□□□□ -1.47
RAPGEF3O95398 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAPGEF3O95398 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAPGEF3O95398 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAPGEF3O95398 RNU6-216P-201ENST00000363282 104 ntBASIC5.85□□□□□ -1.47
RAPGEF3O95398 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RAPGEF3O95398 CYCSP45-201ENST00000402289 315 ntBASIC5.85□□□□□ -1.47
RAPGEF3O95398 AC005300.1-201ENST00000428401 373 ntBASIC5.85□□□□□ -1.47
RAPGEF3O95398 AC005326.1-201ENST00000429197 123 ntBASIC5.85□□□□□ -1.47
RAPGEF3O95398 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.85□□□□□ -1.47
RAPGEF3O95398 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.85□□□□□ -1.47
RAPGEF3O95398 AC073063.1-201ENST00000434352 607 ntBASIC5.85□□□□□ -1.47
RAPGEF3O95398 COX6CP2-201ENST00000444980 225 ntBASIC5.85□□□□□ -1.47
RAPGEF3O95398 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.85□□□□□ -1.47
RAPGEF3O95398 HMGN3P1-201ENST00000453847 193 ntBASIC5.85□□□□□ -1.47
RAPGEF3O95398 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.85□□□□□ -1.47
RAPGEF3O95398 RPL32P34-201ENST00000486380 400 ntBASIC5.85□□□□□ -1.47
RAPGEF3O95398 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.85□□□□□ -1.47
RAPGEF3O95398 HMGB1P28-201ENST00000507778 552 ntBASIC5.85□□□□□ -1.47
RAPGEF3O95398 AC090151.1-201ENST00000520784 730 ntBASIC5.85□□□□□ -1.47
RAPGEF3O95398 AC022695.1-201ENST00000522089 237 ntBASIC5.85□□□□□ -1.47
RAPGEF3O95398 PHBP17-201ENST00000528576 541 ntBASIC5.85□□□□□ -1.47
RAPGEF3O95398 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAPGEF3O95398 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RAPGEF3O95398 SERPINE4P-201ENST00000554978 281 ntBASIC5.85□□□□□ -1.47
RAPGEF3O95398 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.85□□□□□ -1.47
RAPGEF3O95398 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.85□□□□□ -1.47
RAPGEF3O95398 AC008759.1-201ENST00000589783 983 ntBASIC5.85□□□□□ -1.47
RAPGEF3O95398 AC004987.4-201ENST00000603383 338 ntBASIC5.85□□□□□ -1.47
RAPGEF3O95398 AC069304.2-201ENST00000605154 435 ntBASIC5.85□□□□□ -1.47
RAPGEF3O95398 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.85□□□□□ -1.47
RAPGEF3O95398 AC064801.1-201ENST00000612025 407 ntBASIC5.85□□□□□ -1.47
RAPGEF3O95398 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAPGEF3O95398 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.85□□□□□ -1.47
RAPGEF3O95398 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RAPGEF3O95398 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RAPGEF3O95398 AL118496.1-201ENST00000440201 1812 ntBASIC5.84□□□□□ -1.47
RAPGEF3O95398 AL133383.2-201ENST00000622958 2336 ntBASIC5.84□□□□□ -1.47
RAPGEF3O95398 RNU6-251P-201ENST00000363235 104 ntBASIC5.84□□□□□ -1.47
RAPGEF3O95398 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RAPGEF3O95398 VDAC2P1-201ENST00000399358 958 ntBASIC5.84□□□□□ -1.47
RAPGEF3O95398 USP9YP33-201ENST00000412220 421 ntBASIC5.84□□□□□ -1.47
RAPGEF3O95398 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.84□□□□□ -1.47
RAPGEF3O95398 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.84□□□□□ -1.47
RAPGEF3O95398 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.84□□□□□ -1.47
RAPGEF3O95398 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.84□□□□□ -1.47
RAPGEF3O95398 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.84□□□□□ -1.47
RAPGEF3O95398 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.84□□□□□ -1.47
RAPGEF3O95398 USP9YP35-201ENST00000435696 412 ntBASIC5.84□□□□□ -1.47
RAPGEF3O95398 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.84□□□□□ -1.47
RAPGEF3O95398 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.84□□□□□ -1.47
RAPGEF3O95398 ELOCP30-201ENST00000447108 299 ntBASIC5.84□□□□□ -1.47
RAPGEF3O95398 RPS3AP46-201ENST00000448352 682 ntBASIC5.84□□□□□ -1.47
RAPGEF3O95398 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.84□□□□□ -1.47
RAPGEF3O95398 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RAPGEF3O95398 DCLRE1CP1-201ENST00000454630 470 ntBASIC5.84□□□□□ -1.47
RAPGEF3O95398 USP9YP10-201ENST00000454868 628 ntBASIC5.84□□□□□ -1.47
RAPGEF3O95398 AL024509.2-201ENST00000493462 493 ntBASIC5.84□□□□□ -1.47
RAPGEF3O95398 RPL7L1P13-201ENST00000511702 739 ntBASIC5.84□□□□□ -1.47
RAPGEF3O95398 USP9YP5-201ENST00000511770 630 ntBASIC5.84□□□□□ -1.47
RAPGEF3O95398 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.84□□□□□ -1.47
RAPGEF3O95398 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.84□□□□□ -1.47
RAPGEF3O95398 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.84□□□□□ -1.47
RAPGEF3O95398 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.84□□□□□ -1.47
RAPGEF3O95398 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.84□□□□□ -1.47
RAPGEF3O95398 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.84□□□□□ -1.47
RAPGEF3O95398 AC092354.1-201ENST00000606057 376 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms