Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC6.43□□□□□ -1.38
PTCD1O75127 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.43□□□□□ -1.38
PTCD1O75127 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.43□□□□□ -1.38
PTCD1O75127 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
PTCD1O75127 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PTCD1O75127 MIR6839-201ENST00000620425 113 ntBASIC6.43□□□□□ -1.38
PTCD1O75127 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
PTCD1O75127 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
PTCD1O75127 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.43□□□□□ -1.38
PTCD1O75127 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
PTCD1O75127 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.43□□□□□ -1.38
PTCD1O75127 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.43□□□□□ -1.38
PTCD1O75127 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
PTCD1O75127 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.43□□□□□ -1.38
PTCD1O75127 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PTCD1O75127 AC092447.10-201ENST00000620607 1652 ntBASIC6.42□□□□□ -1.38
PTCD1O75127 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
PTCD1O75127 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
PTCD1O75127 RNY4P16-201ENST00000364768 94 ntBASIC6.42□□□□□ -1.38
PTCD1O75127 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC6.42□□□□□ -1.38
PTCD1O75127 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
PTCD1O75127 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PTCD1O75127 AL024474.1-201ENST00000404655 591 ntBASIC6.42□□□□□ -1.38
PTCD1O75127 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.42□□□□□ -1.38
PTCD1O75127 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.42□□□□□ -1.38
PTCD1O75127 AC009310.1-201ENST00000414414 451 ntBASIC6.42□□□□□ -1.38
PTCD1O75127 RPL35AP12-201ENST00000425362 338 ntBASIC6.42□□□□□ -1.38
PTCD1O75127 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.42□□□□□ -1.38
PTCD1O75127 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.42□□□□□ -1.38
PTCD1O75127 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC6.42□□□□□ -1.38
PTCD1O75127 RPL19P16-201ENST00000433839 588 ntBASIC6.42□□□□□ -1.38
PTCD1O75127 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC6.42□□□□□ -1.38
PTCD1O75127 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.42□□□□□ -1.38
PTCD1O75127 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC6.42□□□□□ -1.38
PTCD1O75127 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.42□□□□□ -1.38
PTCD1O75127 RPS26P56-201ENST00000444468 240 ntBASIC6.42□□□□□ -1.38
PTCD1O75127 snoU13.1-201ENST00000459157 104 ntBASIC6.42□□□□□ -1.38
PTCD1O75127 APOOP2-201ENST00000461561 539 ntBASIC6.42□□□□□ -1.38
PTCD1O75127 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC6.42□□□□□ -1.38
PTCD1O75127 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.42□□□□□ -1.38
PTCD1O75127 SNORA40.12-201ENST00000516329 111 ntBASIC6.42□□□□□ -1.38
PTCD1O75127 RNA5SP392-201ENST00000516905 112 ntBASIC6.42□□□□□ -1.38
PTCD1O75127 IGKV1-32-201ENST00000519290 311 ntBASIC6.42□□□□□ -1.38
PTCD1O75127 AC022616.3-201ENST00000523940 148 ntBASIC6.42□□□□□ -1.38
PTCD1O75127 AP000907.2-201ENST00000530827 353 ntBASIC6.42□□□□□ -1.38
PTCD1O75127 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.42□□□□□ -1.38
PTCD1O75127 PDCD5P1-201ENST00000543528 309 ntBASIC6.42□□□□□ -1.38
PTCD1O75127 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC6.42□□□□□ -1.38
PTCD1O75127 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.42□□□□□ -1.38
PTCD1O75127 MIR7853-201ENST00000584820 132 ntBASIC6.42□□□□□ -1.38
PTCD1O75127 AL353997.4-201ENST00000586196 166 ntBASIC6.42□□□□□ -1.38
PTCD1O75127 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC6.42□□□□□ -1.38
PTCD1O75127 AL442067.1-201ENST00000613261 223 ntBASIC6.42□□□□□ -1.38
PTCD1O75127 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.42□□□□□ -1.38
PTCD1O75127 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.42□□□□□ -1.38
PTCD1O75127 ATP8A2P2-201ENST00000437678 1568 ntBASIC6.42□□□□□ -1.38
PTCD1O75127 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PTCD1O75127 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PTCD1O75127 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.42□□□□□ -1.38
PTCD1O75127 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.42□□□□□ -1.38
PTCD1O75127 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PTCD1O75127 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
PTCD1O75127 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.42□□□□□ -1.38
PTCD1O75127 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PTCD1O75127 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
PTCD1O75127 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.41□□□□□ -1.38
PTCD1O75127 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PTCD1O75127 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
PTCD1O75127 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PTCD1O75127 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
PTCD1O75127 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.41□□□□□ -1.38
PTCD1O75127 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.41□□□□□ -1.38
PTCD1O75127 Y_RNA.67-201ENST00000362870 100 ntBASIC6.41□□□□□ -1.38
PTCD1O75127 RNU4-1-201ENST00000363925 141 ntBASIC6.41□□□□□ -1.38
PTCD1O75127 RNU6-169P-201ENST00000365336 107 ntBASIC6.41□□□□□ -1.38
PTCD1O75127 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
PTCD1O75127 AL591416.1-201ENST00000404015 867 ntBASIC6.41□□□□□ -1.38
PTCD1O75127 RGS17P1-201ENST00000423358 553 ntBASIC6.41□□□□□ -1.38
PTCD1O75127 AC009965.2-201ENST00000425328 970 ntBASIC6.41□□□□□ -1.38
PTCD1O75127 RPL7AP49-201ENST00000429522 581 ntBASIC6.41□□□□□ -1.38
PTCD1O75127 AL591438.1-201ENST00000433508 581 ntBASIC6.41□□□□□ -1.38
PTCD1O75127 GPR143P-201ENST00000434155 205 ntBASIC6.41□□□□□ -1.38
PTCD1O75127 RPS29P9-201ENST00000440360 171 ntBASIC6.41□□□□□ -1.38
PTCD1O75127 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC6.41□□□□□ -1.38
PTCD1O75127 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.41□□□□□ -1.38
PTCD1O75127 HMGB1P15-201ENST00000453854 435 ntBASIC6.41□□□□□ -1.38
PTCD1O75127 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PTCD1O75127 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC6.41□□□□□ -1.38
PTCD1O75127 AP000893.1-201ENST00000474462 794 ntBASIC6.41□□□□□ -1.38
PTCD1O75127 AC005726.1-201ENST00000494679 427 ntBASIC6.41□□□□□ -1.38
PTCD1O75127 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC6.41□□□□□ -1.38
PTCD1O75127 TXNP6-201ENST00000510190 310 ntBASIC6.41□□□□□ -1.38
PTCD1O75127 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC6.41□□□□□ -1.38
PTCD1O75127 AC098976.1-201ENST00000513014 541 ntBASIC6.41□□□□□ -1.38
PTCD1O75127 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC6.41□□□□□ -1.38
PTCD1O75127 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC6.41□□□□□ -1.38
PTCD1O75127 RNU6-1046P-201ENST00000516538 107 ntBASIC6.41□□□□□ -1.38
PTCD1O75127 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.41□□□□□ -1.38
PTCD1O75127 OR4R1P-201ENST00000529879 463 ntBASIC6.41□□□□□ -1.38
PTCD1O75127 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms