Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.64□□□□□ -1.83
SNX3O60493 AL360081.1-201ENST00000428299 555 ntBASIC3.64□□□□□ -1.83
SNX3O60493 USP9YP9-201ENST00000429406 715 ntBASIC3.64□□□□□ -1.83
SNX3O60493 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.64□□□□□ -1.83
SNX3O60493 MTND1P32-201ENST00000433043 938 ntBASIC3.64□□□□□ -1.83
SNX3O60493 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.64□□□□□ -1.83
SNX3O60493 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.64□□□□□ -1.83
SNX3O60493 MTND2P28-201ENST00000457540 1044 ntBASIC3.64□□□□□ -1.83
SNX3O60493 OR9M1P-201ENST00000459641 921 ntBASIC3.64□□□□□ -1.83
SNX3O60493 RPS15AP17-201ENST00000470598 390 ntBASIC3.64□□□□□ -1.83
SNX3O60493 AC084357.1-201ENST00000473404 255 ntBASIC3.64□□□□□ -1.83
SNX3O60493 RPL32P9-201ENST00000487963 407 ntBASIC3.64□□□□□ -1.83
SNX3O60493 RPS27AP13-201ENST00000498403 237 ntBASIC3.64□□□□□ -1.83
SNX3O60493 AC105233.1-201ENST00000498840 781 ntBASIC3.64□□□□□ -1.83
SNX3O60493 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX3O60493 MTCYBP35-201ENST00000503630 1137 ntBASIC3.64□□□□□ -1.83
SNX3O60493 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.64□□□□□ -1.83
SNX3O60493 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX3O60493 AC104986.1-201ENST00000517978 436 ntBASIC3.64□□□□□ -1.83
SNX3O60493 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX3O60493 LRRC34P1-201ENST00000542742 915 ntBASIC3.64□□□□□ -1.83
SNX3O60493 DUXAP1-201ENST00000556632 463 ntBASIC3.64□□□□□ -1.83
SNX3O60493 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.64□□□□□ -1.83
SNX3O60493 MIR5047-201ENST00000579212 100 ntBASIC3.64□□□□□ -1.83
SNX3O60493 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.64□□□□□ -1.83
SNX3O60493 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX3O60493 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.64□□□□□ -1.83
SNX3O60493 AC005255.1-201ENST00000593748 216 ntBASIC3.64□□□□□ -1.83
SNX3O60493 AC245036.5-201ENST00000596330 847 ntBASIC3.64□□□□□ -1.83
SNX3O60493 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.64□□□□□ -1.83
SNX3O60493 AL163642.2-201ENST00000604722 1019 ntBASIC3.64□□□□□ -1.83
SNX3O60493 OR6R2P-201ENST00000609216 300 ntBASIC3.64□□□□□ -1.83
SNX3O60493 TUSC7.1-201ENST00000610969 165 ntBASIC3.64□□□□□ -1.83
SNX3O60493 AL049539.1-201ENST00000611964 459 ntBASIC3.64□□□□□ -1.83
SNX3O60493 AC243773.3-201ENST00000613270 256 ntBASIC3.64□□□□□ -1.83
SNX3O60493 AC073968.1-201ENST00000618594 637 ntBASIC3.64□□□□□ -1.83
SNX3O60493 AC022149.2-201ENST00000621061 203 ntBASIC3.64□□□□□ -1.83
SNX3O60493 AC091953.3-201ENST00000623220 236 ntBASIC3.64□□□□□ -1.83
SNX3O60493 AC010608.2-201ENST00000624830 470 ntBASIC3.64□□□□□ -1.83
SNX3O60493 CYP3A51P-201ENST00000633513 256 ntBASIC3.64□□□□□ -1.83
SNX3O60493 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SNX3O60493 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SNX3O60493 AC026951.1-201ENST00000559530 2459 ntBASIC3.64□□□□□ -1.83
SNX3O60493 MTCO1P23-201ENST00000415223 1526 ntBASIC3.64□□□□□ -1.83
SNX3O60493 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.64□□□□□ -1.83
SNX3O60493 LARP1BP1-201ENST00000506036 1359 ntBASIC3.63□□□□□ -1.83
SNX3O60493 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.63□□□□□ -1.83
SNX3O60493 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNX3O60493 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNX3O60493 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.63□□□□□ -1.83
SNX3O60493 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNX3O60493 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNX3O60493 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNX3O60493 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNX3O60493 RNU6-989P-201ENST00000362756 107 ntBASIC3.63□□□□□ -1.83
SNX3O60493 SNORD113-6-201ENST00000363345 75 ntBASIC3.63□□□□□ -1.83
SNX3O60493 RNA5SP366-201ENST00000365454 123 ntBASIC3.63□□□□□ -1.83
SNX3O60493 RNU6-805P-201ENST00000365643 106 ntBASIC3.63□□□□□ -1.83
SNX3O60493 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX3O60493 RPL31P1-201ENST00000398116 372 ntBASIC3.63□□□□□ -1.83
SNX3O60493 RNA5SP56-201ENST00000410277 118 ntBASIC3.63□□□□□ -1.83
SNX3O60493 RN7SKP33-201ENST00000410942 340 ntBASIC3.63□□□□□ -1.83
SNX3O60493 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.63□□□□□ -1.83
SNX3O60493 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX3O60493 RPL7P53-201ENST00000421245 739 ntBASIC3.63□□□□□ -1.83
SNX3O60493 AL592293.2-201ENST00000422292 996 ntBASIC3.63□□□□□ -1.83
SNX3O60493 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.63□□□□□ -1.83
SNX3O60493 GLRXP1-201ENST00000423261 334 ntBASIC3.63□□□□□ -1.83
SNX3O60493 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SNX3O60493 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.63□□□□□ -1.83
SNX3O60493 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX3O60493 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.63□□□□□ -1.83
SNX3O60493 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.63□□□□□ -1.83
SNX3O60493 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX3O60493 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.63□□□□□ -1.83
SNX3O60493 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SNX3O60493 AC021205.2-201ENST00000480069 347 ntBASIC3.63□□□□□ -1.83
SNX3O60493 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX3O60493 AC108475.1-201ENST00000507880 950 ntBASIC3.63□□□□□ -1.83
SNX3O60493 TXNP6-201ENST00000510190 310 ntBASIC3.63□□□□□ -1.83
SNX3O60493 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX3O60493 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SNX3O60493 RN7SKP116-201ENST00000516902 319 ntBASIC3.63□□□□□ -1.83
SNX3O60493 RN7SKP289-201ENST00000517244 295 ntBASIC3.63□□□□□ -1.83
SNX3O60493 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SNX3O60493 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX3O60493 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX3O60493 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SNX3O60493 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.63□□□□□ -1.83
SNX3O60493 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX3O60493 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.63□□□□□ -1.83
SNX3O60493 AC087465.1-201ENST00000560574 245 ntBASIC3.63□□□□□ -1.83
SNX3O60493 AC009712.1-201ENST00000564938 316 ntBASIC3.63□□□□□ -1.83
SNX3O60493 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX3O60493 MIR4637-201ENST00000582405 84 ntBASIC3.63□□□□□ -1.83
SNX3O60493 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.63□□□□□ -1.83
SNX3O60493 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.63□□□□□ -1.83
SNX3O60493 AC112230.1-201ENST00000604342 547 ntBASIC3.63□□□□□ -1.83
SNX3O60493 AL355493.4-201ENST00000618530 292 ntBASIC3.63□□□□□ -1.83
SNX3O60493 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms