Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.77□□□□□ -1.81
SSX4O60224 AC098592.1-201ENST00000419352 333 ntBASIC3.77□□□□□ -1.81
SSX4O60224 AC012065.2-201ENST00000421295 375 ntBASIC3.77□□□□□ -1.81
SSX4O60224 AL022400.1-201ENST00000423946 935 ntBASIC3.77□□□□□ -1.81
SSX4O60224 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.77□□□□□ -1.81
SSX4O60224 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.77□□□□□ -1.81
SSX4O60224 AC122718.1-201ENST00000439448 744 ntBASIC3.77□□□□□ -1.81
SSX4O60224 AL356535.1-201ENST00000440335 398 ntBASIC3.77□□□□□ -1.81
SSX4O60224 MTND5P2-201ENST00000442927 1142 ntBASIC3.77□□□□□ -1.81
SSX4O60224 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.77□□□□□ -1.81
SSX4O60224 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.77□□□□□ -1.81
SSX4O60224 MTCYBP3-201ENST00000445588 1137 ntBASIC3.77□□□□□ -1.81
SSX4O60224 AL606662.1-201ENST00000445763 553 ntBASIC3.77□□□□□ -1.81
SSX4O60224 RPL23AP43-201ENST00000446445 471 ntBASIC3.77□□□□□ -1.81
SSX4O60224 AC012671.1-201ENST00000451912 203 ntBASIC3.77□□□□□ -1.81
SSX4O60224 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.77□□□□□ -1.81
SSX4O60224 MTCO3P11-201ENST00000455103 774 ntBASIC3.77□□□□□ -1.81
SSX4O60224 FAM133DP-201ENST00000464802 691 ntBASIC3.77□□□□□ -1.81
SSX4O60224 AC091167.1-201ENST00000492017 396 ntBASIC3.77□□□□□ -1.81
SSX4O60224 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.77□□□□□ -1.81
SSX4O60224 AC106872.2-201ENST00000494303 480 ntBASIC3.77□□□□□ -1.81
SSX4O60224 AC090453.1-201ENST00000495560 436 ntBASIC3.77□□□□□ -1.81
SSX4O60224 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.77□□□□□ -1.81
SSX4O60224 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.77□□□□□ -1.81
SSX4O60224 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.77□□□□□ -1.81
SSX4O60224 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.77□□□□□ -1.81
SSX4O60224 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.77□□□□□ -1.81
SSX4O60224 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.77□□□□□ -1.81
SSX4O60224 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.77□□□□□ -1.81
SSX4O60224 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.77□□□□□ -1.81
SSX4O60224 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.77□□□□□ -1.81
SSX4O60224 RPL23AP92-201ENST00000603609 255 ntBASIC3.77□□□□□ -1.81
SSX4O60224 AL357094.1-201ENST00000603845 844 ntBASIC3.77□□□□□ -1.81
SSX4O60224 AC025588.4-201ENST00000615802 908 ntBASIC3.77□□□□□ -1.81
SSX4O60224 AL713922.2-201ENST00000619384 716 ntBASIC3.77□□□□□ -1.81
SSX4O60224 AC079228.1-201ENST00000624774 1049 ntBASIC3.77□□□□□ -1.81
SSX4O60224 MIR3653-201ENST00000625572 110 ntBASIC3.77□□□□□ -1.81
SSX4O60224 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.77□□□□□ -1.81
SSX4O60224 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
SSX4O60224 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SSX4O60224 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.77□□□□□ -1.81
SSX4O60224 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
SSX4O60224 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SSX4O60224 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SSX4O60224 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
SSX4O60224 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.77□□□□□ -1.81
SSX4O60224 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.77□□□□□ -1.81
SSX4O60224 OR4G11P-202ENST00000642116 1414 ntBASIC3.77□□□□□ -1.81
SSX4O60224 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
SSX4O60224 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SSX4O60224 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.76□□□□□ -1.81
SSX4O60224 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SSX4O60224 CPHL1P-201ENST00000461341 3407 ntBASIC3.76□□□□□ -1.81
SSX4O60224 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.76□□□□□ -1.81
SSX4O60224 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
SSX4O60224 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.76□□□□□ -1.81
SSX4O60224 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SSX4O60224 AL391994.1-201ENST00000254724 282 ntBASIC3.76□□□□□ -1.81
SSX4O60224 AC007685.1-201ENST00000329806 452 ntBASIC3.76□□□□□ -1.81
SSX4O60224 MIR383-201ENST00000362257 73 ntBASIC3.76□□□□□ -1.81
SSX4O60224 MIR331-201ENST00000362302 94 ntBASIC3.76□□□□□ -1.81
SSX4O60224 RNU6-989P-201ENST00000362756 107 ntBASIC3.76□□□□□ -1.81
SSX4O60224 RNU6-761P-201ENST00000384148 107 ntBASIC3.76□□□□□ -1.81
SSX4O60224 AC025750.1-201ENST00000399891 379 ntBASIC3.76□□□□□ -1.81
SSX4O60224 AL590084.2-201ENST00000401481 382 ntBASIC3.76□□□□□ -1.81
SSX4O60224 AL049545.1-201ENST00000401856 572 ntBASIC3.76□□□□□ -1.81
SSX4O60224 HMGB1P17-201ENST00000403495 628 ntBASIC3.76□□□□□ -1.81
SSX4O60224 RNU6-628P-201ENST00000410675 107 ntBASIC3.76□□□□□ -1.81
SSX4O60224 AMD1P2-201ENST00000412936 992 ntBASIC3.76□□□□□ -1.81
SSX4O60224 GLRXP1-201ENST00000423261 334 ntBASIC3.76□□□□□ -1.81
SSX4O60224 AL593851.1-201ENST00000426171 157 ntBASIC3.76□□□□□ -1.81
SSX4O60224 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SSX4O60224 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.76□□□□□ -1.81
SSX4O60224 TXNL1P1-201ENST00000429528 554 ntBASIC3.76□□□□□ -1.81
SSX4O60224 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.76□□□□□ -1.81
SSX4O60224 RPS6P15-201ENST00000431996 751 ntBASIC3.76□□□□□ -1.81
SSX4O60224 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SSX4O60224 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.76□□□□□ -1.81
SSX4O60224 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.76□□□□□ -1.81
SSX4O60224 RPS7P7-201ENST00000463499 571 ntBASIC3.76□□□□□ -1.81
SSX4O60224 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.76□□□□□ -1.81
SSX4O60224 RPS3AP22-201ENST00000488297 769 ntBASIC3.76□□□□□ -1.81
SSX4O60224 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.76□□□□□ -1.81
SSX4O60224 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.76□□□□□ -1.81
SSX4O60224 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.76□□□□□ -1.81
SSX4O60224 ATP1B1P1-201ENST00000509767 915 ntBASIC3.76□□□□□ -1.81
SSX4O60224 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
SSX4O60224 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SSX4O60224 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.76□□□□□ -1.81
SSX4O60224 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SSX4O60224 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.76□□□□□ -1.81
SSX4O60224 HSPA8P13-201ENST00000523715 472 ntBASIC3.76□□□□□ -1.81
SSX4O60224 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.76□□□□□ -1.81
SSX4O60224 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.76□□□□□ -1.81
SSX4O60224 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.76□□□□□ -1.81
SSX4O60224 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.76□□□□□ -1.81
SSX4O60224 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.76□□□□□ -1.81
SSX4O60224 MRPS36P5-201ENST00000551909 298 ntBASIC3.76□□□□□ -1.81
SSX4O60224 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.76□□□□□ -1.81
SSX4O60224 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms