Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MIR548S-201ENST00000581352 82 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.21□□□□□ -1.74
SMAD6O43541 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SMAD6O43541 AC091805.2-201ENST00000603848 235 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 AC009220.3-201ENST00000604318 586 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 NDUFA8P1-201ENST00000605525 367 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 LARP7P1-201ENST00000605576 316 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 AC069545.1-201ENST00000605671 358 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 AC080013.4-201ENST00000607624 649 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 AF250324.2-201ENST00000608299 610 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 AC017083.3-201ENST00000609955 700 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 AC023158.2-201ENST00000614876 543 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 AL359314.1-201ENST00000616913 261 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 AL136981.2-201ENST00000617319 734 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 AC007342.8-201ENST00000623278 678 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 AC022140.2-201ENST00000623500 188 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 AC095031.1-201ENST00000623685 672 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.21□□□□□ -1.74
SMAD6O43541 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
SMAD6O43541 RLIMP1-201ENST00000339626 1680 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 AC116667.1-201ENST00000604855 2072 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SMAD6O43541 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.21□□□□□ -1.74
SMAD6O43541 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
SMAD6O43541 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.2□□□□□ -1.74
SMAD6O43541 CR848007.1-201ENST00000442354 1699 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMAD6O43541 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SMAD6O43541 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SMAD6O43541 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMAD6O43541 OR11H4-201ENST00000315409 1082 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMAD6O43541 Y_RNA.88-201ENST00000363029 99 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 RNA5SP283-201ENST00000365604 119 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SMAD6O43541 RPS23P10-201ENST00000416185 486 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.2□□□□□ -1.74
SMAD6O43541 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SMAD6O43541 AC092832.1-201ENST00000422934 400 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.2□□□□□ -1.74
SMAD6O43541 AC010975.2-201ENST00000427781 588 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.2□□□□□ -1.74
SMAD6O43541 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
SMAD6O43541 AC241584.1-201ENST00000438469 1241 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SMAD6O43541 AL671855.1-201ENST00000446875 1203 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 AC072039.1-201ENST00000477611 581 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 AC126182.1-201ENST00000478134 357 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.2□□□□□ -1.74
SMAD6O43541 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.2□□□□□ -1.74
SMAD6O43541 AC109464.2-201ENST00000510242 943 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 KRT19P6-201ENST00000510983 209 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 RN7SKP82-201ENST00000516786 223 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 MYL12AP1-201ENST00000518490 515 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.2□□□□□ -1.74
SMAD6O43541 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.2□□□□□ -1.74
SMAD6O43541 AC083923.1-201ENST00000523708 376 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 AC005832.3-201ENST00000537929 631 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.2□□□□□ -1.74
SMAD6O43541 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.2□□□□□ -1.74
SMAD6O43541 AC005771.1-201ENST00000585581 349 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 AC091135.1-201ENST00000585943 307 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 OR4G1P-201ENST00000588632 938 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.2□□□□□ -1.74
SMAD6O43541 AC007684.1-201ENST00000609671 477 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 AC064801.1-201ENST00000612025 407 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 AC011472.4-201ENST00000615848 491 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.2□□□□□ -1.74
SMAD6O43541 AC015726.3-201ENST00000624501 418 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 SEPT14P19-203ENST00000633205 211 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SMAD6O43541 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SMAD6O43541 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SMAD6O43541 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.2□□□□□ -1.74
SMAD6O43541 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.2□□□□□ -1.74
SMAD6O43541 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.2□□□□□ -1.74
SMAD6O43541 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMAD6O43541 MTND4P31-201ENST00000425607 1343 ntBASIC4.2□□□□□ -1.74
SMAD6O43541 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMAD6O43541 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
SMAD6O43541 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SMAD6O43541 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.19□□□□□ -1.74
SMAD6O43541 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.19□□□□□ -1.74
SMAD6O43541 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SMAD6O43541 KPNA2P2-201ENST00000419546 1489 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SMAD6O43541 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SMAD6O43541 ENSAP1-201ENST00000392855 326 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 TPT1P2-201ENST00000413105 503 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 AC108032.1-201ENST00000416706 207 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 FNDC3CP-201ENST00000420795 1155 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 RPL7P44-201ENST00000424827 742 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 MTCO2P19-201ENST00000427513 598 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.19□□□□□ -1.74
SMAD6O43541 AL117339.2-201ENST00000430475 180 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 RPS24P8-201ENST00000431490 402 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.19□□□□□ -1.74
SMAD6O43541 RPL23AP89-201ENST00000439324 255 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 CBX1P4-201ENST00000439415 457 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms