Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.9□□□□□ -1.79
O00370 RNU6-444P-201ENST00000383988 108 ntBASIC3.9□□□□□ -1.79
O00370 SNORD3H-201ENST00000384486 214 ntBASIC3.9□□□□□ -1.79
O00370 AL590704.1-201ENST00000402856 794 ntBASIC3.9□□□□□ -1.79
O00370 AL136310.1-201ENST00000404926 654 ntBASIC3.9□□□□□ -1.79
O00370 AL133264.1-201ENST00000407157 562 ntBASIC3.9□□□□□ -1.79
O00370 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.9□□□□□ -1.79
O00370 HMGB3P20-201ENST00000417997 600 ntBASIC3.9□□□□□ -1.79
O00370 RPL21P112-201ENST00000434403 463 ntBASIC3.9□□□□□ -1.79
O00370 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.9□□□□□ -1.79
O00370 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.9□□□□□ -1.79
O00370 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.9□□□□□ -1.79
O00370 AC093155.1-201ENST00000440164 826 ntBASIC3.9□□□□□ -1.79
O00370 NF1P3-201ENST00000457709 450 ntBASIC3.9□□□□□ -1.79
O00370 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.9□□□□□ -1.79
O00370 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.9□□□□□ -1.79
O00370 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.9□□□□□ -1.79
O00370 RPL23AP44-201ENST00000482216 473 ntBASIC3.9□□□□□ -1.79
O00370 SLC25A15P5-201ENST00000508033 253 ntBASIC3.9□□□□□ -1.79
O00370 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.9□□□□□ -1.79
O00370 AC113347.3-201ENST00000509113 148 ntBASIC3.9□□□□□ -1.79
O00370 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.9□□□□□ -1.79
O00370 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
O00370 USP9YP5-201ENST00000511770 630 ntBASIC3.9□□□□□ -1.79
O00370 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.9□□□□□ -1.79
O00370 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.9□□□□□ -1.79
O00370 RN7SKP265-201ENST00000516448 223 ntBASIC3.9□□□□□ -1.79
O00370 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.9□□□□□ -1.79
O00370 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.9□□□□□ -1.79
O00370 AL139174.1-201ENST00000531489 886 ntBASIC3.9□□□□□ -1.79
O00370 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.9□□□□□ -1.79
O00370 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.9□□□□□ -1.79
O00370 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.9□□□□□ -1.79
O00370 MIR4425-201ENST00000580572 84 ntBASIC3.9□□□□□ -1.79
O00370 AC090616.5-202ENST00000582111 297 ntBASIC3.9□□□□□ -1.79
O00370 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.9□□□□□ -1.79
O00370 AL365503.1-201ENST00000605247 905 ntBASIC3.9□□□□□ -1.79
O00370 AC013244.3-201ENST00000605614 388 ntBASIC3.9□□□□□ -1.79
O00370 AL392048.1-201ENST00000613946 534 ntBASIC3.9□□□□□ -1.79
O00370 AC006963.1-201ENST00000624003 1052 ntBASIC3.9□□□□□ -1.79
O00370 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.9□□□□□ -1.79
O00370 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
O00370 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.9□□□□□ -1.79
O00370 SEPT7P7-201ENST00000420492 1301 ntBASIC3.9□□□□□ -1.79
O00370 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
O00370 ELL2P4-201ENST00000446870 1376 ntBASIC3.89□□□□□ -1.79
O00370 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
O00370 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
O00370 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
O00370 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
O00370 RNU6-600P-201ENST00000362524 99 ntBASIC3.89□□□□□ -1.79
O00370 SNORA31-201ENST00000362607 130 ntBASIC3.89□□□□□ -1.79
O00370 RNU6-582P-201ENST00000362989 107 ntBASIC3.89□□□□□ -1.79
O00370 RNU6-839P-201ENST00000363347 108 ntBASIC3.89□□□□□ -1.79
O00370 RNU6-619P-201ENST00000365146 108 ntBASIC3.89□□□□□ -1.79
O00370 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.89□□□□□ -1.79
O00370 RNU6-413P-201ENST00000384115 107 ntBASIC3.89□□□□□ -1.79
O00370 SNORA40.2-201ENST00000390847 128 ntBASIC3.89□□□□□ -1.79
O00370 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.89□□□□□ -1.79
O00370 RN7SKP202-201ENST00000410439 330 ntBASIC3.89□□□□□ -1.79
O00370 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.89□□□□□ -1.79
O00370 AL136133.1-201ENST00000413694 376 ntBASIC3.89□□□□□ -1.79
O00370 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.89□□□□□ -1.79
O00370 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.89□□□□□ -1.79
O00370 MTND2P16-201ENST00000419987 799 ntBASIC3.89□□□□□ -1.79
O00370 AL159169.1-201ENST00000421119 127 ntBASIC3.89□□□□□ -1.79
O00370 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.89□□□□□ -1.79
O00370 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.89□□□□□ -1.79
O00370 SEPT7P5-201ENST00000434048 306 ntBASIC3.89□□□□□ -1.79
O00370 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.89□□□□□ -1.79
O00370 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.89□□□□□ -1.79
O00370 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.89□□□□□ -1.79
O00370 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.89□□□□□ -1.79
O00370 AL591719.1-201ENST00000444669 744 ntBASIC3.89□□□□□ -1.79
O00370 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.89□□□□□ -1.79
O00370 AC099563.1-201ENST00000456086 418 ntBASIC3.89□□□□□ -1.79
O00370 SNORA84-201ENST00000459229 133 ntBASIC3.89□□□□□ -1.79
O00370 RN7SL542P-201ENST00000467147 294 ntBASIC3.89□□□□□ -1.79
O00370 RPL23AP14-201ENST00000468281 468 ntBASIC3.89□□□□□ -1.79
O00370 AC087879.1-201ENST00000474343 374 ntBASIC3.89□□□□□ -1.79
O00370 AC091951.3-201ENST00000504093 246 ntBASIC3.89□□□□□ -1.79
O00370 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.89□□□□□ -1.79
O00370 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.89□□□□□ -1.79
O00370 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.89□□□□□ -1.79
O00370 RN7SKP60-201ENST00000516985 239 ntBASIC3.89□□□□□ -1.79
O00370 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.89□□□□□ -1.79
O00370 AC008489.1-201ENST00000524271 483 ntBASIC3.89□□□□□ -1.79
O00370 MED28P5-201ENST00000528254 438 ntBASIC3.89□□□□□ -1.79
O00370 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.89□□□□□ -1.79
O00370 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.89□□□□□ -1.79
O00370 AL121766.1-201ENST00000547436 487 ntBASIC3.89□□□□□ -1.79
O00370 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.89□□□□□ -1.79
O00370 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.89□□□□□ -1.79
O00370 AADACP1-206ENST00000561502 1193 ntBASIC3.89□□□□□ -1.79
O00370 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.89□□□□□ -1.79
O00370 AC022069.1-201ENST00000582910 658 ntBASIC3.89□□□□□ -1.79
O00370 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.89□□□□□ -1.79
O00370 AC008121.2-201ENST00000614647 523 ntBASIC3.89□□□□□ -1.79
O00370 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
O00370 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms