Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 HSPE1P28-201ENST00000443139 211 ntBASIC3.48□□□□□ -1.85
PDLIM1O00151 Z77249.1-201ENST00000444622 1175 ntBASIC3.48□□□□□ -1.85
PDLIM1O00151 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.48□□□□□ -1.85
PDLIM1O00151 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.48□□□□□ -1.85
PDLIM1O00151 GAPDHP27-201ENST00000447427 1020 ntBASIC3.48□□□□□ -1.85
PDLIM1O00151 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.48□□□□□ -1.85
PDLIM1O00151 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.48□□□□□ -1.85
PDLIM1O00151 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.48□□□□□ -1.85
PDLIM1O00151 RPS4XP15-201ENST00000489210 795 ntBASIC3.48□□□□□ -1.85
PDLIM1O00151 CAB39P1-201ENST00000502277 460 ntBASIC3.48□□□□□ -1.85
PDLIM1O00151 PRELID3BP6-201ENST00000503839 571 ntBASIC3.48□□□□□ -1.85
PDLIM1O00151 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
PDLIM1O00151 RNA5SP135-201ENST00000517019 125 ntBASIC3.48□□□□□ -1.85
PDLIM1O00151 AC245166.1-201ENST00000521012 253 ntBASIC3.48□□□□□ -1.85
PDLIM1O00151 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.48□□□□□ -1.85
PDLIM1O00151 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.48□□□□□ -1.85
PDLIM1O00151 AC007536.1-201ENST00000533382 349 ntBASIC3.48□□□□□ -1.85
PDLIM1O00151 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PDLIM1O00151 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.48□□□□□ -1.85
PDLIM1O00151 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.48□□□□□ -1.85
PDLIM1O00151 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.48□□□□□ -1.85
PDLIM1O00151 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.48□□□□□ -1.85
PDLIM1O00151 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
PDLIM1O00151 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.48□□□□□ -1.85
PDLIM1O00151 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.48□□□□□ -1.85
PDLIM1O00151 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.48□□□□□ -1.85
PDLIM1O00151 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.48□□□□□ -1.85
PDLIM1O00151 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.48□□□□□ -1.85
PDLIM1O00151 MAGOH2P-202ENST00000584384 429 ntBASIC3.48□□□□□ -1.85
PDLIM1O00151 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.48□□□□□ -1.85
PDLIM1O00151 AC078899.3-201ENST00000599065 212 ntBASIC3.48□□□□□ -1.85
PDLIM1O00151 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.48□□□□□ -1.85
PDLIM1O00151 AP003973.1-201ENST00000604639 691 ntBASIC3.48□□□□□ -1.85
PDLIM1O00151 AC099676.1-201ENST00000608886 657 ntBASIC3.48□□□□□ -1.85
PDLIM1O00151 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
PDLIM1O00151 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.48□□□□□ -1.85
PDLIM1O00151 AC087821.2-201ENST00000637086 450 ntBASIC3.48□□□□□ -1.85
PDLIM1O00151 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PDLIM1O00151 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PDLIM1O00151 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PDLIM1O00151 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PDLIM1O00151 AL122126.1-201ENST00000546905 1318 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 AC004972.1-201ENST00000623934 2209 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PDLIM1O00151 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PDLIM1O00151 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.47□□□□□ -1.85
PDLIM1O00151 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PDLIM1O00151 RNU6-582P-201ENST00000362989 107 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 RNU6-115P-201ENST00000364310 107 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 MIR122-201ENST00000385044 85 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 MIR887-201ENST00000401258 79 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 RSL24D1P1-201ENST00000404972 493 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 AL133264.1-201ENST00000407157 562 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.47□□□□□ -1.85
PDLIM1O00151 AC009237.2-201ENST00000421358 284 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 C1DP1-201ENST00000426049 402 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 SETP8-201ENST00000435341 628 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 NPM1P49-201ENST00000448027 714 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.47□□□□□ -1.85
PDLIM1O00151 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 AC020898.1-201ENST00000474167 787 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.47□□□□□ -1.85
PDLIM1O00151 AC093752.1-206ENST00000511823 336 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.47□□□□□ -1.85
PDLIM1O00151 RNU6-885P-201ENST00000516607 104 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.47□□□□□ -1.85
PDLIM1O00151 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.47□□□□□ -1.85
PDLIM1O00151 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.47□□□□□ -1.85
PDLIM1O00151 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.47□□□□□ -1.85
PDLIM1O00151 AL606490.9-201ENST00000603331 271 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 AC092953.2-201ENST00000608000 699 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 AC098679.5-201ENST00000624394 571 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 AC099654.9-201ENST00000637055 678 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.47□□□□□ -1.85
PDLIM1O00151 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PDLIM1O00151 AC110774.1-201ENST00000623567 2018 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 MTND5P31-201ENST00000419366 1374 ntBASIC3.47□□□□□ -1.85
PDLIM1O00151 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.47□□□□□ -1.85
PDLIM1O00151 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.47□□□□□ -1.85
PDLIM1O00151 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
PDLIM1O00151 AL645568.2-201ENST00000432815 1337 ntBASIC3.46□□□□□ -1.85
PDLIM1O00151 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PDLIM1O00151 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PDLIM1O00151 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PDLIM1O00151 Y_RNA.126-201ENST00000363382 111 ntBASIC3.46□□□□□ -1.86
PDLIM1O00151 RNA5SP235-201ENST00000365411 114 ntBASIC3.46□□□□□ -1.86
PDLIM1O00151 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.46□□□□□ -1.86
PDLIM1O00151 RPS3AP9-201ENST00000417027 792 ntBASIC3.46□□□□□ -1.86
PDLIM1O00151 HMGB3P20-201ENST00000417997 600 ntBASIC3.46□□□□□ -1.86
PDLIM1O00151 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.46□□□□□ -1.86
PDLIM1O00151 AC006989.1-201ENST00000427212 131 ntBASIC3.46□□□□□ -1.86
PDLIM1O00151 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.46□□□□□ -1.86
PDLIM1O00151 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.46□□□□□ -1.86
PDLIM1O00151 AC239367.2-201ENST00000447309 705 ntBASIC3.46□□□□□ -1.86
PDLIM1O00151 RPL21P8-201ENST00000465083 535 ntBASIC3.46□□□□□ -1.86
PDLIM1O00151 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.46□□□□□ -1.86
PDLIM1O00151 AC021205.2-201ENST00000480069 347 ntBASIC3.46□□□□□ -1.86
PDLIM1O00151 RPS3AP6-201ENST00000484430 795 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms