Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 RNA5SP135-201ENST00000517019 125 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 RPP40P2-201ENST00000603596 712 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 AL034351.1-201ENST00000605288 668 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 AL157392.4-201ENST00000609756 345 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 MIR8058-201ENST00000615737 89 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 AL157770.1-201ENST00000623049 439 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 C2orf27A-204ENST00000623058 969 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 AC109454.4-201ENST00000623411 649 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 AC087821.2-201ENST00000637086 450 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 RNU6-839P-201ENST00000363347 108 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 SNORA72.3-201ENST00000365074 132 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 AC008280.1-201ENST00000418851 412 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 OR1AA1P-201ENST00000419597 916 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 RPP40P1-201ENST00000426762 456 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 RAC1P8-201ENST00000427086 527 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 RPL36P19-201ENST00000430744 301 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 MRPS18BP2-201ENST00000434310 759 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 AL606517.1-201ENST00000446914 387 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 Z99714.1-201ENST00000450463 807 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 HMGN2P7-201ENST00000456186 273 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 RN7SL93P-201ENST00000463035 293 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 RPL37P6-202ENST00000464216 403 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 AP000563.1-201ENST00000490865 758 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 RN7SKP83-201ENST00000516512 178 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 OR10V3P-201ENST00000525712 725 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 AL031985.2-201ENST00000600955 480 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 RNU4-5P-201ENST00000607255 135 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 AL158163.2-201ENST00000619110 700 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 AC023510.2-201ENST00000622162 746 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 AC091953.5-201ENST00000622919 233 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 AL078595.3-201ENST00000623815 1166 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 RPS4XP5-202ENST00000449995 1334 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 DCAF13P3-201ENST00000561147 1334 ntBASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
NEDD8-MDP1E9PL57 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 NCAPGP1-201ENST00000505112 1814 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 ZNF29P-201ENST00000225587 168 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 RNU6-582P-201ENST00000362989 107 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 SNORA9-201ENST00000384215 133 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 Y_RNA.472-201ENST00000384322 102 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 BX323014.1-201ENST00000412876 237 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 AC233981.1-201ENST00000423224 461 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 MOB1AP1-201ENST00000430903 535 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 AC005019.1-201ENST00000436455 431 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 HMGB3P6-201ENST00000444896 598 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 AC112492.1-201ENST00000449607 712 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 DUXAP8-207ENST00000456786 622 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 BX510359.1-201ENST00000456973 237 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 AC023598.1-201ENST00000472521 361 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 RPL21P131-201ENST00000497298 483 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 AC026427.2-201ENST00000506228 536 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 RNU2-27P-201ENST00000516185 142 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 RNU6-579P-201ENST00000516879 102 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 MTND2P32-201ENST00000521584 1038 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms