Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 AC098824.1-201ENST00000453565 980 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 DNAJC19P1-201ENST00000455312 319 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 TRBV26-201ENST00000456572 344 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 snoU13.22-201ENST00000459428 104 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 AC084024.2-201ENST00000503480 791 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 AC096571.1-202ENST00000506634 735 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 DEFB130C-202ENST00000530001 230 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 AP000619.3-201ENST00000535634 1127 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 GTF2IP22-201ENST00000554443 182 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 AC069200.1-201ENST00000609511 323 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 AC009237.15-201ENST00000610252 501 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 AC090116.1-201ENST00000615679 446 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 AC021755.1-201ENST00000559747 1447 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 AL021368.2-201ENST00000606125 5352 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 AC130650.2-201ENST00000618736 2403 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 HMGB1P5-201ENST00000255320 642 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 RNU6-600P-201ENST00000362524 99 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 RNA5SP322-201ENST00000363617 119 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 RNU6-263P-201ENST00000363811 107 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 RNU6-707P-201ENST00000364647 95 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 SNORA70.4-201ENST00000365509 134 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 HLFP1-201ENST00000402375 499 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 AL079342.2-201ENST00000403367 482 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 AL583834.1-201ENST00000406943 343 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 RNA5SP44-201ENST00000410446 133 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 AC093578.1-201ENST00000415219 368 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 RPS6P14-201ENST00000425165 719 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 GTF2IP3-201ENST00000433887 494 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 RPL23AP16-201ENST00000441715 421 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 SETD6P1-201ENST00000444575 317 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 AL136126.1-201ENST00000473603 402 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 AC079203.1-201ENST00000487972 404 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 AC104619.4-201ENST00000510773 249 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 AC010342.1-201ENST00000514047 877 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 ZNF705CP-201ENST00000530515 889 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 AC093519.1-201ENST00000566109 298 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 AC012182.1-201ENST00000570133 895 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 BNIP3P39-201ENST00000601077 554 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 AC012314.7-201ENST00000619693 93 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 PLCE1P1-201ENST00000622094 305 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 AC104985.3-201ENST00000623479 597 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 AL512506.2-201ENST00000624472 458 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 AC010608.3-201ENST00000625048 527 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 AP003485.1-201ENST00000625093 753 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
NPIPA2E9PIF3 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA2E9PIF3 AP001350.1-201ENST00000601906 1524 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms