Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 OR5B10P-201ENST00000532869 642 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 UBE2NP1-201ENST00000545592 458 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 MIR4444-1-201ENST00000581696 74 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 MIR4444-2-201ENST00000584390 74 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 RNA5SP108-201ENST00000605921 117 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 U3.45-201ENST00000607547 219 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 AC034229.4-201ENST00000607861 441 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 AL157392.4-201ENST00000609756 345 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 AC022079.2-201ENST00000619739 566 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 AP003476.1-201ENST00000623984 516 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 AC244258.1-201ENST00000637553 1071 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 AL133383.2-201ENST00000622958 2336 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 ENSAP3-201ENST00000312710 333 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 RNU6-353P-201ENST00000364266 108 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 RNU6-1242P-201ENST00000391052 103 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 RNA5SP498-201ENST00000411342 120 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 MTCO2P8-201ENST00000412213 658 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 HSFY4P-201ENST00000415994 1181 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 MTCYBP32-201ENST00000427945 1084 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 RPS12P18-201ENST00000442381 270 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 TRAV31-201ENST00000502780 342 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 AC021678.1-201ENST00000505195 936 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 SLC25A15P5-201ENST00000508033 253 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 RNU6-276P-201ENST00000516114 96 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 RNA5SP380-201ENST00000517190 98 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 PAICSP4-201ENST00000517543 1253 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 AC083923.1-201ENST00000523708 376 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 HIGD1AP1-201ENST00000550979 275 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 AC023824.3-201ENST00000569003 562 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 MIR2682-201ENST00000580305 110 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 AL160237.3-201ENST00000604114 1013 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 MIR92B-201ENST00000607575 96 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 AC013468.1-201ENST00000608680 598 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 uc_338.25-201ENST00000613756 156 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 AL121594.5-201ENST00000631724 573 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 AL392088.2-201ENST00000637607 285 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 AC139713.2-210ENST00000641741 992 ntBASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM49D1C9J1S8 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 MIR218-2-201ENST00000385006 110 ntBASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 MIR670-201ENST00000390142 98 ntBASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 RNA5SP171-201ENST00000391071 115 ntBASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 HMGN1P24-201ENST00000412282 298 ntBASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 AC105402.1-201ENST00000413336 545 ntBASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 AC068135.1-201ENST00000446164 246 ntBASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 OR51B8P-201ENST00000449892 769 ntBASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 AC092451.1-201ENST00000480211 153 ntBASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 AC092185.1-201ENST00000491371 97 ntBASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 RPL30P11-201ENST00000495304 339 ntBASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 AC087894.1-201ENST00000538359 518 ntBASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 AC074050.1-201ENST00000563247 211 ntBASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 MTCO1P40-201ENST00000574371 625 ntBASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 MIR5186-201ENST00000577504 120 ntBASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 RN7SL339P-201ENST00000580597 296 ntBASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 AC124283.4-201ENST00000581815 456 ntBASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 LLPHP1-201ENST00000603571 367 ntBASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 AC079610.2-201ENST00000604818 690 ntBASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 AC009974.1-201ENST00000608881 455 ntBASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 CYCSP41-201ENST00000616920 296 ntBASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms