Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 RPL7P50-201ENST00000600588 727 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AL161729.3-201ENST00000603533 673 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AP003117.2-201ENST00000606010 545 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AC097468.3-201ENST00000607956 456 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AC239868.4-201ENST00000608318 671 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AC012360.2-201ENST00000609349 391 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 FAM27D1-201ENST00000612308 341 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AC090116.1-201ENST00000615679 446 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AC005086.4-201ENST00000623065 213 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AL592437.2-201ENST00000421655 2434 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 SNORD82-201ENST00000365530 70 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 Y_RNA.553-201ENST00000384670 102 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 SNORD116-4-201ENST00000384733 96 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 SNORD96B-201ENST00000386148 79 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 RN7SKP142-201ENST00000411236 328 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 BTF3P10-201ENST00000433415 495 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 AC127537.2-201ENST00000439258 465 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 COX6CP12-201ENST00000446748 202 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 BX322784.1-201ENST00000455793 1077 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 RPS27AP13-201ENST00000498403 237 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 MTND4P2-201ENST00000507767 1203 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 PGBD4P4-201ENST00000509673 613 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 AC005798.1-201ENST00000513715 387 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 MTND5P4-201ENST00000514978 288 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 RNA5SP73-201ENST00000516744 108 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 IGKV2D-36-201ENST00000518643 226 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 COX6CP8-201ENST00000522620 226 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 RPL23AP92-201ENST00000603609 255 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 AL109618.2-201ENST00000605527 211 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 AC103710.4-201ENST00000609301 899 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 AL445363.3-201ENST00000623080 671 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 MIR4496-201ENST00000635896 61 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 AC090582.1-201ENST00000636321 199 ntBASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.28□□□□□ -1.72
TBC1D3FA6NER0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 Y_RNA.97-201ENST00000363094 102 ntBASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 Y_RNA.194-201ENST00000363985 102 ntBASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 SNORA37-201ENST00000384504 129 ntBASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 AL031679.1-201ENST00000400616 525 ntBASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 AC108032.1-201ENST00000416706 207 ntBASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 FNDC3CP-201ENST00000420795 1155 ntBASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 OFD1P18Y-201ENST00000420889 959 ntBASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 MTCO3P5-201ENST00000433620 714 ntBASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 MTCO1P19-201ENST00000443487 500 ntBASIC4.27□□□□□ -1.73
TBC1D3FA6NER0 CDC27P1-201ENST00000445384 715 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms